Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02464 ATGGACACCACCTCCGACGGAGACACGTCCGCGTCGTACAGAGAGAAGGCTAAGGAGAAGGAACGGGTGAGCAGGACGTCGCTGATTCACTGGCATTCGCACCATAACGACGCCGCGGCGGTTCGGAAGCTTCTAGAAGAGGATCCCTCCCTCGTGCATGCACGTGACTATGACAACCGAACGCCCCTCCACGTGGCCTCCCTCCACGGCTGGGCCGACGTTGCCAGCTGCCTCATAGAGTTTGGTGCTGACGTCAACGCCCAAGACCGATGGAGAAACACGCCCCTGGCTGATGCGGAAGGAGCAAAGAGGAATTCAGTGATTGAGCTTTTGAAGTTACGTGGAGGATTGTCTTATGGCCAAAATGGAAGTCATTTAGAACATAGGCCTGTTCCACCCCCATTGCCTAACAGGTGTGATTGGGAAGTTGACCCTACAGAGCTGGACTTCTCGAATTCAATTTGTATTGGAAAGGGATCTTTTGGTGAGATTTTAAGAGCTCATTGGCGTGGAACACCTGTTGCTGTCAAACGCATTCTTCCAGCTCTTTCAGATGATAGATTGGTGATTCAGGACTTCAGGCATGAGGTTAATTTGCTAGTGAAACTTCGCCACCCTAATGTTGTTCAATTTCTTGGAGCTGTTACTGATAGGAAGCCTCTAATGTTGATTACTGAGTATCTAAGAGGGGGTGATCTTCATAGGTACCTCAAGGTTAAAAGTTCACTTAGTACTTCAACAGCGATCAACTTTGCCATGGATATTGCCAGAGGGATGGCCTATCTTCACAGTGAACCAAATGTTATAATTCATCGAGATCTCAAGCCAAGGAATGTTCTTTTGGTCAATTCTTGTGCCGACTATTTAAAAGTAGGAGATTTTGGACTTAGCAAGCTTATTAAAGTCAAAAGTTCTCATGATGTGTACAAGATGACTGGTGAAACTGGAAGTTACCGCTATATGGCTCCTGAAGTTTTCAAACACCGGAGATATGACAAGAAGGTTGATGTGTTCTCCTTTGCTATGATTTTGTATGAGATGCTTGAAGGTGAACCACCATTTACAAATTTAGAACCTTATGAGGGAGCCAAGCATGTGGCTGAGGGACACAGGCCAATTATTCGAGCGAAAGGTTATGGTCCTGAACTACGAGAGTTAATAGAGCTTTGTTGGGCTGGTGACATGACTCAAAGACCTTCCTTCCTAGATATCCTTAAACGGCTTGAGAAGATCAAAGAAAAACCTTCAGAGCATCACTGGCATTTGTTCTCTTCATAA 1278 0.4601 MDTTSDGDTSASYREKAKEKERVSRTSLIHWHSHHNDAAAVRKLLEEDPSLVHARDYDNRTPLHVASLHGWADVASCLIEFGADVNAQDRWRNTPLADAEGAKRNSVIELLKLRGGLSYGQNGSHLEHRPVPPPLPNRCDWEVDPTELDFSNSICIGKGSFGEILRAHWRGTPVAVKRILPALSDDRLVIQDFRHEVNLLVKLRHPNVVQFLGAVTDRKPLMLITEYLRGGDLHRYLKVKSSLSTSTAINFAMDIARGMAYLHSEPNVIIHRDLKPRNVLLVNSCADYLKVGDFGLSKLIKVKSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPPFTNLEPYEGAKHVAEGHRPIIRAKGYGPELRELIELCWAGDMTQRPSFLDILKRLEKIKEKPSEHHWHLFSS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02464 425 SMART ANK_2a 58 87 IPR002110 GO:0005515
Arst5g02464 425 SMART ANK_2a 24 54 IPR002110 GO:0005515
Arst5g02464 425 SUPERFAMILY Ankyrin repeat 28 113 IPR036770 -
Arst5g02464 425 ProSiteProfiles Ankyrin repeat region circular profile. 58 90 - -
Arst5g02464 425 ProSitePatterns Protein kinases ATP-binding region signature. 156 177 IPR017441 GO:0005524
Arst5g02464 425 Gene3D Transferase(Phosphotransferase) domain 1 230 422 - -
Arst5g02464 425 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 84 412 - -
Arst5g02464 425 Pfam Protein tyrosine and serine/threonine kinase 156 408 IPR001245 GO:0004672|GO:0006468
Arst5g02464 425 SUPERFAMILY Protein kinase-like (PK-like) 149 416 IPR011009 -
Arst5g02464 425 Gene3D - 2 124 IPR036770 -
Arst5g02464 425 MobiDBLite consensus disorder prediction 9 25 - -
Arst5g02464 425 FunFam Integrin-linked protein kinase family 229 423 - -
Arst5g02464 425 ProSiteProfiles Protein kinase domain profile. 150 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g02464 425 FunFam serine/threonine-protein kinase STY46-like 143 229 - -
Arst5g02464 425 PIRSF ILK 2 425 - -
Arst5g02464 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Arst5g02464 425 Gene3D Phosphorylase Kinase; domain 1 142 229 - -
Arst5g02464 425 CDD STKc_MAP3K-like 156 408 - -
Arst5g02464 425 SMART serkin_6 150 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g02464 425 ProSiteProfiles Ankyrin repeat profile. 58 90 IPR002110 GO:0005515
Arst5g02464 425 Pfam Ankyrin repeats (many copies) 44 96 IPR002110 GO:0005515
Arst5g02464 425 PRINTS Tyrosine kinase catalytic domain signature 379 401 IPR001245 GO:0004672|GO:0006468
Arst5g02464 425 PRINTS Tyrosine kinase catalytic domain signature 263 281 IPR001245 GO:0004672|GO:0006468
Arst5g02464 425 PRINTS Tyrosine kinase catalytic domain signature 225 238 IPR001245 GO:0004672|GO:0006468
Arst5g02464 425 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02464 Arst-Chr5 63575106 63586405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02464 10 425 MAP Kinase Kinase Kinase AT1G14000 81.535 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Arst5g02464 PK_Tyr_Ser-Thr 1.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02464 - - gmx:100793237 731.095