Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02444 ATGTCGACGGAGAAGGAGAGAGAGACCCAAGTTTATTTGGCTAAACTTGCTGAACAAGCGGAGAGATATGAAGAAATGGTCGAATGCATGAAGAAAGTAGCGAAACTTGATCTTGAGCTAACTGTTGAAGAGAGGAATCTCCTATCAGTTGGATACAAAAACGTCATTGGTGCAAGGAGAGCCTCTTGGCGCATAATGTCCTCAATCGAGCAAAAGGAAGAGTCTAAGGGTAATGAGCACAATGTTAAGCTGATCAAGAGCTATTGTCAAAAGGTTGAGGAGGAACTCTCAAAGATTTGCAATGACATTCTCACAATTATAGACCAACATCTGATTTCCTCTTCCACCTCAGCAGAAGCTAATGTTTTCTACTATAAGATGAAAGGTGATTATTTTCGATATCTTGCAGAGTTCAAAACTGACCAAGAAAGGAAAGAGGCAGCTGAGCAATCGCTCAAAGGATATGAAGCTGCTTCAGCAACTGCAAACACAGATCTTCCACCAACGCATCCAATCCGTCTTGGACTTGCACTCAACTTTTCTGTGTTTTATTATGAAATAATGAACTCTCCTGAAAGGGCTTGCCATTTAGCAAAACAAGCTTTTGACGAGGCAATTGCAGAATTGGACACATTGAGTGAAGAATCATACAAGGATAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTAACTCTCTGGACCTCCGACTTACCTGAGGATGGAGGTGAGGATAACGTAAAAGCTGAAGAAGCCAAACCTACTGAGACTGAGCATCTTGTGGATTGGAAACAATTGAAAAAGGATTGGAAGATTGCTGAGATTGAGGAAATTCTTAAAAGGGTGGTGAAGCCTAATTTTAGAGGAGTTTATATCCGATTTTTTTAG 888 0.4088 MSTEKERETQVYLAKLAEQAERYEEMVECMKKVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKSYCQKVEEELSKICNDILTIIDQHLISSSTSAEANVFYYKMKGDYFRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNVKAEEAKPTETEHLVDWKQLKKDWKIAEIEEILKRVVKPNFRGVYIRFF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02444 295 PIRSF 14-3-3 1 250 IPR000308 -
Arst5g02444 295 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Arst5g02444 295 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Arst5g02444 295 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Arst5g02444 295 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Arst5g02444 295 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Arst5g02444 295 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Arst5g02444 295 Pfam 14-3-3 protein 13 235 IPR023410 -
Arst5g02444 295 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Arst5g02444 295 PANTHER 14-3-3 PROTEIN 7 238 IPR000308 -
Arst5g02444 295 Coils Coil 13 33 - -
Arst5g02444 295 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Arst5g02444 295 FunFam 14-3-3 protein epsilon 1 249 - -
Arst5g02444 295 Gene3D - 1 249 IPR036815 -
Arst5g02444 295 SMART 1433_4 7 248 IPR023410 -
Arst5g02444 295 Coils Coil 195 215 - -
Arst5g02444 295 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02444 Arst-Chr5 60400627 60406051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02444 2 253 14-3-3 family AT1G26480 85.714 9.96e-162 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02444 - K06630 adu:107489470 586.26