Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02425 ATGCCGCCGCTCACTGATTTCCGCTTCTTCAGATTCATAATCCCCAACATGGAGAATCAAATTAGAATGCCGGTGGCCTTCTCCAACGTTGTACGGGATAACATGAGCAACCCCATCGAGGTAATCACCACAAATGGTCAGTTGTGGAACATCTCGTGGGTTGTCGAGGGGGAGCATCCGCATCGAATCGTATTCACCGGAGGCTGGCGAGCCTTTTACGAACACTACCACCTTCAAATCGGTGACTCAAGGCTACTATCGTATCACCAACCAAAGTTTTTCTATGTGGCCATCCACGACACAAGATTCTGCGAGATCAACTACGAAAGATAA 333 0.4835 MPPLTDFRFFRFIIPNMENQIRMPVAFSNVVRDNMSNPIEVITTNGQLWNISWVVEGEHPHRIVFTGGWRAFYEHYHLQIGDSRLLSYHQPKFFYVAIHDTRFCEINYER 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02425 110 SMART B3_2 9 102 IPR003340 GO:0003677
Arst5g02425 110 PANTHER B3 DOMAIN-CONTAINING 7 108 - -
Arst5g02425 110 SUPERFAMILY DNA-binding pseudobarrel domain 9 108 IPR015300 -
Arst5g02425 110 Gene3D - 4 104 IPR015300 -
Arst5g02425 110 ProSiteProfiles B3 DNA-binding domain profile. 6 102 IPR003340 GO:0003677
Arst5g02425 110 Pfam B3 DNA binding domain 18 100 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02425 Arst-Chr5 58658551 58658969 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02425 18 108 B3 DNA Binding Superfamily AT3G18990 26.374 5.15e-07 44.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst5g02425 B3 3e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02425 - K15113 adu:107489457 239.58