Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02424 ATGGCTTCGTCGGCTCCATCAATGGAAAGAAGGACTGCAATTGTTTTTGGAGGAAATTCTCCAATTTTGCGTGTTTCGCTAAATTACCGCATTGTTGCTCTTTGGCACAGGGTTGCCGAGGATGAAGATACCACTAGGGGCGTGTGCGTCGCCGATGAAGCAGAAATGTCCGACGGAGTAAACCACAGAGTTGGATCGGTTGAGGGCGAACGCTCTGCAGGGATGGAGTCGGATGAGCACAACTTTCAGGAAGATGATACAGAACACGACCATCACGCAGAAGCCGATGTCGACAATGGGGATGCGGTTGAATTGGAAGACAGTTTGGATGGTGCCGGAGGAATGTTTGATAATTATGCAGAAGACGAGTTTTACGCCGTTGATTCCGTGGAGTCGATAGGTTGGATTAATTTTTTGAACTTGAGCAAGGAGGATGTTCTCCGATTTAATTTTGCTGATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGCGCGAGACGTTCCAGAAGCGAAAAACGCGGTGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTACACGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGTTGCCATGTTGCCTACTTTTCAGACGCGCATAACCACCACGCTCTTGAGTTGCAATTTTCTTCCATGCTCCTGAGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAGCGACATGCGCAAAGGGGGCATTGGCGTCTCCCGAATCTATGGTTTTATGGCGAGCCTGGCCGGCAGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCTAGATGTGGAATCGTGCCTAAGGTATCTCCGAGAGTGCAAGGCAAATGATCCAGCACTGTACTACAAGGAAGTTGTTGACGGTGAGGGCGTGTTTGGAGACGTGGTTGCATTTGATGCAACGTACAAGAAAAACGTTTACCTTTCACCTCTTGTAGTATTCTCCGGTGTGAATTACCACAACCAAACGGTTGTCTTTGCCGCTGCATTGGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAGCAGTTGCAAACTTCAATGAAAGGAAAGTCTCCCGTGTCCATAACAACCGACGGTGACAGGCAAATGAATTCTGCGATCGAGCAAATTTTTTCAGAGGCTCACCATCGACTCTATGCTTGGCATCTACTCCGAAACACCACGAGCAACATCGGAAAGCCCAAATTCACCAGGATGTTTAGGGATTGCATGCTCGGAGACTACGAGGTTAGAACATTTCAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCATCGCCGATAAAAGATGGGTACAGGACATGTACGAGAGAAGGCACAGTTGGGCCACAGCACACATACGGGGAAAGTTCTTTGCCGGATATCGAACAACATCAAGGTGCGAGGGCTTGCACGCTGTGATATCACAGTATGTTAAGTCTGGATACAGCTACACTGAGTTTTTACATCATTTCCATCGATGCTTGATGTTCGTGCACGCAAAGGAGGTGGAAGCTGATTTCGAGTGTGCAAAGGGTGACCCTGTTATGACCACCAACCTAAAACAACTGGAGCAGAGTGCAGCCGACAACTACACTCGTGCAATATTCTATTTGTTTGTTCCCATTCTTGACAGGGCCTGTGCAATGAAGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATCCACTCCGTCTCTCGATACAGAACTCCAGAGAAGGATTGGCGTGTTGTTGCAACGTCTGATACGAGGGAGGTCCGATGCATGTGCATGAGAATGGAATGTTTTGGGGTCCCCTGCGAACATATAATTATGGTGCTTGTTCTTAACAATGTTCATGAGATCCCGAGGTCTCTGATATTACCGAGATGGACCAAGGAAGCAAAACTTGTGGCGGTGCAGTCGATGGGCGTGATTTGGGATTCTATACAACTGACGCAACACTGGTGTCTGATGGATTGGTACCGGAAAGTGTGCAAGATTGCATGTCACAGCACCCAAAAGTTCCAGTTTGCAAGAGACATTGCCGTGCTGATGCTGAAGCACTTCGAGAACGAAGATGCAGGGGACACCAGTTTTCCACCCGAGGGGCCACCTACTGAGGGTGGCAGACCCCCGACGCAGAATCCACCCAGGCGCAATACAAACGGTAATGGTGCTCATGGTGGAAAGAAAACCCAGCGATGTCGTTTGTGCCGGGAGGTGGGACACAACAGGACGACGTGTCCGGATCGTCGCACAATGGAATCATCCAGCGTTGTTGCGGATGAATAG 2433 0.4953 MASSAPSMERRTAIVFGGNSPILRVSLNYRIVALWHRVAEDEDTTRGVCVADEAEMSDGVNHRVGSVEGERSAGMESDEHNFQEDDTEHDHHAEADVDNGDAVELEDSLDGAGGMFDNYAEDEFYAVDSVESIGWINFLNLSKEDVLRFNFADVDIAFEFYQQYAKHHGFGARRSRSEKRGEVRIRQEFVCHRQGYRSPKFYTMPNRQKRPRAETRCGCPARMLLRMDDESGRCHVAYFSDAHNHHALELQFSSMLLSHRRMSEADIEQMSDMRKGGIGVSRIYGFMASLAGRYHNVPYTTRDMHNVNAKQRREGGLDVESCLRYLRECKANDPALYYKEVVDGEGVFGDVVAFDATYKKNVYLSPLVVFSGVNYHNQTVVFAAALVADEKEETYVWLLQQLQTSMKGKSPVSITTDGDRQMNSAIEQIFSEAHHRLYAWHLLRNTTSNIGKPKFTRMFRDCMLGDYEVRTFQRKWFEMVEKFGIADKRWVQDMYERRHSWATAHIRGKFFAGYRTTSRCEGLHAVISQYVKSGYSYTEFLHHFHRCLMFVHAKEVEADFECAKGDPVMTTNLKQLEQSAADNYTRAIFYLFVPILDRACAMKVVDSEDNGSYFIHSVSRYRTPEKDWRVVATSDTREVRCMCMRMECFGVPCEHIIMVLVLNNVHEIPRSLILPRWTKEAKLVAVQSMGVIWDSIQLTQHWCLMDWYRKVCKIACHSTQKFQFARDIAVLMLKHFENEDAGDTSFPPEGPPTEGGRPPTQNPPRRNTNGNGAHGGKKTQRCRLCREVGHNRTTCPDRRTMESSSVVADE 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02424 810 MobiDBLite consensus disorder prediction 69 100 - -
Arst5g02424 810 MobiDBLite consensus disorder prediction 740 783 - -
Arst5g02424 810 SUPERFAMILY Retrovirus zinc finger-like domains 766 802 IPR036875 GO:0003676|GO:0008270
Arst5g02424 810 MobiDBLite consensus disorder prediction 72 99 - -
Arst5g02424 810 MobiDBLite consensus disorder prediction 760 775 - -
Arst5g02424 810 Pfam FAR1 DNA-binding domain 159 247 IPR004330 -
Arst5g02424 810 Pfam MULE transposase domain 351 445 IPR018289 -
Arst5g02424 810 ProSiteProfiles Zinc finger SWIM-type profile. 628 664 IPR007527 GO:0008270
Arst5g02424 810 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 148 729 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02424 Arst-Chr5 58653731 58656276 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst5g02424 MULE 5.4e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02424 - - aip:107647116 1363.21