LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst5g02396	ATGGATTTCGACCTTTACTCAAGCGATAATGATGAAGAGTCATCAGAGATGTCGTTGGGTGTGTGTGGTTCTTCAGGGTCCTCTGATGACGACGACAGTACTAGCTTATTTGGCATAGGAACAAGTCACTCGGAATCGAACAAAGAATCGCATCGCTCAGAAGGGGATGTTCACGGCAAGGTGCCTGTGTTACTTACCGCAGAGGACTTCTTGCATACAGTTTTCACTTCTGAGGAGGAGGCCTACAATGCTTACAAGGAGTTTGCCTGGACAAGGGGGTTTGGTGTTTGCAAGGGGGATGTGGGACGGGTTGACGGTGTTTTAGTGAGGCGGGACATCTTCTGTCATCGTCAGGGCACGAGGAGTGACAAGCATTATGATAGGCCAGAACGAGTAAGGGAGGAGCGGCTGGAGAGTCGCACGGACTGCAAGGCAAAATTGAAAATATACTATGATGTGCATGATAATGTGTGGAGAGTGCGAAAGATTATTGATGAACACAACCACGACATGGCTCCGGCTGAGTTTTGCAACCTGTTGCCAAGTCACCGAAAAATGAGCGACGGGGATAAGGCTCAAGTGAATAGCATGAAGCAATTTGGAATTCCTACCTCGAAAATAATGGCTTACATGGCAGGCCAATCGGGTGGCTACAGCATGCTTCGGTTTACAAAAAGGGATTTGTACAATTATGTTCACAGTCAACGCCGAGCACGAATCTTGGATGGGGATGCAGCTGCAACTATAAGCTACCTAGAGGGGAAGGCAAATGCGGACCTTATGTTAGTCGCCAGATACACAACGACTGTAGATAATCGGTTGGGTAGCTTATTTTGGGTGGACGGTATCATGAAATCCGATTATGAGTTGTTTGGTGATGTCCTTGCATTTGACGCGACATACCGTGGGAACAAGTACAAGAAACCTCTGGTGGTGTTCTCTCTGCTAATGAACCATATGCGAAGCCAGAACATTGCGTGCGGCCTCCCCGGAAATTATGTTTTCTTCCTATCTAATAGACATCTCTCAGTTTAG	1035	0.4725	MDFDLYSSDNDEESSEMSLGVCGSSGSSDDDDSTSLFGIGTSHSESNKESHRSEGDVHGKVPVLLTAEDFLHTVFTSEEEAYNAYKEFAWTRGFGVCKGDVGRVDGVLVRRDIFCHRQGTRSDKHYDRPERVREERLESRTDCKAKLKIYYDVHDNVWRVRKIIDEHNHDMAPAEFCNLLPSHRKMSDGDKAQVNSMKQFGIPTSKIMAYMAGQSGGYSMLRFTKRDLYNYVHSQRRARILDGDAAATISYLEGKANADLMLVARYTTTVDNRLGSLFWVDGIMKSDYELFGDVLAFDATYRGNKYKKPLVVFSLLMNHMRSQNIACGLPGNYVFFLSNRHLSV	344

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst5g02396	344	MobiDBLite	consensus disorder prediction	1	57	-	-
	Arst5g02396	344	MobiDBLite	consensus disorder prediction	12	44	-	-
	Arst5g02396	344	Pfam	FAR1 DNA-binding domain	85	172	IPR004330	-
	Arst5g02396	344	PANTHER	OS01G0519700 PROTEIN	69	314	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst5g02396	Arst-Chr5	57021051	57022085	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Arst5g02396		FAR1	3.1e-16	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst5g02396	-		-	adu:107489511	670.233