Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02392 ATGGTAATTTCCTACAAGGAGTGCCTCAAGAACCATGCAGCCACCATCGGCGGCCACGCCCTCGACGGCTGCGGCGAGTTCATGCCCTCCTCCTCCTCCAACCCCTCTGAGCCACGCTCCCTCACTTGCGCCGCATGTGGCTGCCACCGCAACTTCCACCGCCGCGACCCATCGCCGCCTCTCCCCCAGCGTGGTGGACTCAGCCTCAGCACAAGCCCAAGCACAACAAGCCCAAGCCCAAGCCCATCAGCAAGTCCAATTTCAAGCCCATCATCACCACCACCTGCCCCACTCTCTCACCACTTTCCTCCTCCTCCACCTCCTCCGTACTCCTCCTTCCACCACCATCACATGAATAATAATTCTCCATCTACCGTTGTTGTTCCCAACATGCTCTTATCCCTTGGAAATGCCGCATGCTCTTCCGGTTCTGGATTCAACCACCACCACCACCACCAGAAAGACTTGAACAGCTCGAAGAAGAGGCATAGGACCAAGTTCAGCAAGGAACAGAAGGAGAAGATGCTGAGATTCTCAGAGAAGCTTGGTTGGAGAATGCAGAGAGATGAAGATGGTTTGATTCAAGAGTTTTGCAACCAAATTGGGGTTTCTAGAGGGGTCTTCAAGGTTTGGATGCACAACAACAAGAACACCTTCTTCAGAAACAGGAACAACAACAACAACAACGATAATGCTTCTGCTGCAGAAAAGAATGGGAGTCTTAATGGTGTTGATAATGGTAACCATATCGATAACGATAATGATGATGATCATAATAATAATGATAATGGAAATGGTAATCAACACAGCAACAACACTAGTAGCAGCAACGATGACATTCACAGAGATTATTAA 855 0.4959 MVISYKECLKNHAATIGGHALDGCGEFMPSSSSNPSEPRSLTCAACGCHRNFHRRDPSPPLPQRGGLSLSTSPSTTSPSPSPSASPISSPSSPPPAPLSHHFPPPPPPPYSSFHHHHMNNNSPSTVVVPNMLLSLGNAACSSGSGFNHHHHHQKDLNSSKKRHRTKFSKEQKEKMLRFSEKLGWRMQRDEDGLIQEFCNQIGVSRGVFKVWMHNNKNTFFRNRNNNNNNDNASAAEKNGSLNGVDNGNHIDNDNDDDHNNNDNGNGNQHSNNTSSSNDDIHRDY 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02392 284 FunFam Zinc-finger homeodomain protein 2 147 221 - -
Arst5g02392 284 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 218 - -
Arst5g02392 284 MobiDBLite consensus disorder prediction 220 284 - -
Arst5g02392 284 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 5 56 IPR006456 -
Arst5g02392 284 MobiDBLite consensus disorder prediction 54 122 - -
Arst5g02392 284 MobiDBLite consensus disorder prediction 142 171 - -
Arst5g02392 284 MobiDBLite consensus disorder prediction 220 248 - -
Arst5g02392 284 Gene3D - 145 219 - -
Arst5g02392 284 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 5 56 IPR006456 -
Arst5g02392 284 SUPERFAMILY Homeodomain-like 147 219 IPR009057 -
Arst5g02392 284 MobiDBLite consensus disorder prediction 79 112 - -
Arst5g02392 284 MobiDBLite consensus disorder prediction 64 78 - -
Arst5g02392 284 Pfam ZF-HD protein dimerisation region 3 56 IPR006456 -
Arst5g02392 284 MobiDBLite consensus disorder prediction 153 168 - -
Arst5g02392 284 NCBIfam homeobox domain, ZF-HD class 160 217 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02392 Arst-Chr5 55787491 55788956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02392 1 235 ZF-HD Transcription Factor Family AT2G02540 38.462 3.80e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Arst5g02392 ZF-HD_dimer 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02392 - - adu:107489397 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g02392 5 55787491 55788956 Arst5g02392 5 55787491 55788956 ECH