LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst5g02295	ATGTGTTATGTGTATGTTGATTTTCGAGAGATAAAGCCATCAGATGGTGATTTTTTTGGAACAGACTCCGATGAAGAGTTCCCAAGAAGAGACAATCTAGATTTTTTAGATGACGATTCGGAGGCTGATAAAGATAGACCTCAAGATAAGAGAATAGCAGAGCTGTCACAGGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGCTGTTTATCGATTCTACAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTGCGTAATTATGTGCCAAATTATTTGCAATCGGGCGGGCTCAAGAAGGGAAGAGGTTGAAAAGCATGAAAGAATCTGGGACCACCGACCCCTAACTCGAAGTTTTTGTCGGGCGAGAATTCGTGCAAGAATAGATAGAAAAATTCATAAATGGAAGGTTGTTTCGTTGTATGAAGAGCACTCTCATGGATTAGTTGATCCACTCGACATTAGCATGATGCGTGAGTATTACACATTCAGTGTCTCGGATAAAGCTCAGGCGAAGAATTTACACGCCATAGGCATCAGGACCTGTCACATCTTGAGATACTTGGCTTCTCAAAAAGGTGGATATGCAAACTTGTCATTTAACCAAAAAGATATGTACAACCTCATTACTTAA	672	0.4092	MCYVYVDFREIKPSDGDFFGTDSDEEFPRRDNLDFLDDDSEADKDRPQDKRIAELSQEDIMQLQFTDEEAVYRFYKTYAMMHGFAVRLDEVRRDSDGCVIMCQIICNRAGSRREEVEKHERIWDHRPLTRSFCRARIRARIDRKIHKWKVVSLYEEHSHGLVDPLDISMMREYYTFSVSDKAQAKNLHAIGIRTCHILRYLASQKGGYANLSFNQKDMYNLIT	223

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst5g02295	223	MobiDBLite	consensus disorder prediction	15	48	-	-
	Arst5g02295	223	Pfam	FAR1 DNA-binding domain	73	162	IPR004330	-
	Arst5g02295	223	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	34	218	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst5g02295	Arst-Chr5	47123967	47126784	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Arst5g02295		FAR1	3.4e-15	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst5g02295	-		-	adu:107489293	456.832