Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02294 ATGGCGATTCATCAACAACGTGAACACACTAGTGTTGTCAGTTTCTTCAAGATCATTTGTCGTTGGCATATTCTAGATGAGAAGATTAAGCTTCCAACGGAATTCACAAACAAGTGTGGATTGAAACTACCAAATCCAGTTATTCTGAAAGTTGTAGATGGCAACCAAAAGAAAGTGCATTGGACCAAAATTAATGGTTCCATTTGGTTTATTGGGAAGGAATGGAAAGAGTTTCTTGAGAACTACTCTGTCTCACACGGCCACCTTTTGTTGTTCAAATATTGTCTTGTGGCTTCATGTTTTGGGGTCCAAATATTTGACAGCACCACTCTTGAAATTGACTACCCTTACCATGAACTCAACTATGATGATTATGAAGATTATTATGAGGATGATGATGATGAAGATGTTGTTGATGTTGTGAAGCTTCAATATGATCAATATCAATTGAAAGATAAAAGTGAGAGTATTGCTGATGCTATAAGAAGTGACAGACTAGAGAGAAAAGATAGCAACCCCAGTTTCGAGGTTGTCATGCAGGATTCATATATCAATGGGGGAAGATGCATGGCCGTACCATCTAATTTTGCAAGGGAGTACATGAAAGAAGGAGGATACCTACTAAGAGTGGCGGATGGGAGGACATGGAAAGTGATGTACAAGACTTGGAGTGGAGATGGGATGCCTTGCAAGAAGTGCAAACTGCAAAAGGGTTGGGCCAAGTTTAGCCAAGGAAACAAGTTAGAGAAGGATGATGTCTGTGTCTTTGAGCTGGTTAATAACAATTGCAATGGTAGTTGCTCCACCATCATACCAACCTTCAATGTTCTAATCCACCGTAACCACATCGGTAGCAGTTATTGA 864 0.3993 MAIHQQREHTSVVSFFKIICRWHILDEKIKLPTEFTNKCGLKLPNPVILKVVDGNQKKVHWTKINGSIWFIGKEWKEFLENYSVSHGHLLLFKYCLVASCFGVQIFDSTTLEIDYPYHELNYDDYEDYYEDDDDEDVVDVVKLQYDQYQLKDKSESIADAIRSDRLERKDSNPSFEVVMQDSYINGGRCMAVPSNFAREYMKEGGYLLRVADGRTWKVMYKTWSGDGMPCKKCKLQKGWAKFSQGNKLEKDDVCVFELVNNNCNGSCSTIIPTFNVLIHRNHIGSSY 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02294 287 Gene3D - 151 282 IPR015300 -
Arst5g02294 287 SUPERFAMILY DNA-binding pseudobarrel domain 170 263 IPR015300 -
Arst5g02294 287 CDD B3_DNA 173 280 IPR003340 GO:0003677
Arst5g02294 287 SUPERFAMILY DNA-binding pseudobarrel domain 10 108 IPR015300 -
Arst5g02294 287 ProSiteProfiles B3 DNA-binding domain profile. 175 275 IPR003340 GO:0003677
Arst5g02294 287 SMART B3_2 175 270 IPR003340 GO:0003677
Arst5g02294 287 SMART B3_2 15 109 IPR003340 GO:0003677
Arst5g02294 287 Gene3D - 7 110 IPR015300 -
Arst5g02294 287 PANTHER B3 DOMAIN-CONTAINING 11 262 - -
Arst5g02294 287 Pfam B3 DNA binding domain 175 264 IPR003340 GO:0003677
Arst5g02294 287 CDD B3_DNA 14 107 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02294 Arst-Chr5 47040939 47043283 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02294 11 143 B3 DNA Binding Superfamily AT1G49475 35.417 7.31e-17 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst5g02294 B3 5.2e-15 CL0405