Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02293 ATGGAGGGTAGTAGAAGAAGCTCAAATTCTGAACTCCCGCCTGGGTTTCGGTTTCACCCAACTGATGAAGAACTAATCGTTCACTACCTTTGTAACCAAGCCACTTCAAAGCCTTGCCCTGCTTCCGTCATCCCTGAAGTTGATATCTATAAGTTTGATCCATGGGAATTACCCGATAAAACAAGCTTTGGAGAGAACGAATGGTACTTCTTTAGCCCAAGGGATAGGAAGTACCCAAATGGGGTGAGGCCTAATAGGGCAACGGTTTCAGGGTATTGGAAGGCCACTGGTACGGACAAAGCAATCTATAGTGGGTCTAAGCATGTTGGGGTCAAGAAAGCTTTGGTCTTTTACAAGGGTAGGCCCCCAAAGGGTATCAAGACTGATTGGATCATGCATGAGTATAGATTGGTTGGATCAAGAAGGCAACCCACTAAACAAATTGGATCCATGAGGCTAGATGACTGGGTGTTATGCAGGATCTACAAGAAGAGGAGCATAGCAAAATCAATGTTGGAGCCTAAAGAGGAATTCCCAACAATGCCCCAAATCAATCATCATCTAACATCATCATCAAATGATGGGAATGATAATAATGATGATGAGCAAGAAATGATGATGAAATTCCCAAGGACATGTTCCCTTACACATCTCTTGGAAATGGACTACTTGGGCCCAATATCACAAATACTCTCTGATGGATCATATAACTCAACCTTTGATTTTCAACTAAACAGTGCCAATGTTGGCAACATGATTATGGACCCTTTTGTGAAACAACCTCAGATCCTTGAAATCCCTAACAAAAATAATCCTAACAATCCTTATTATGATGTGGATTCAGGGAAGAACAACCTAGTGAAACAGAATAGCACCATAAACCCTACTATATTTGTGAACCAATTCTTTGATCATAGTGGTAGTTAA 927 0.4132 MEGSRRSSNSELPPGFRFHPTDEELIVHYLCNQATSKPCPASVIPEVDIYKFDPWELPDKTSFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHVGVKKALVFYKGRPPKGIKTDWIMHEYRLVGSRRQPTKQIGSMRLDDWVLCRIYKKRSIAKSMLEPKEEFPTMPQINHHLTSSSNDGNDNNDDEQEMMMKFPRTCSLTHLLEMDYLGPISQILSDGSYNSTFDFQLNSANVGNMIMDPFVKQPQILEIPNKNNPNNPYYDVDSGKNNLVKQNSTINPTIFVNQFFDHSGS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02293 308 Pfam No apical meristem (NAM) protein 13 137 IPR003441 GO:0003677|GO:0006355
Arst5g02293 308 Gene3D NAC domain 21 168 IPR036093 GO:0003677|GO:0006355
Arst5g02293 308 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 208 - -
Arst5g02293 308 FunFam NAC transcription factor 21 168 - -
Arst5g02293 308 SUPERFAMILY NAC domain 10 164 IPR036093 GO:0003677|GO:0006355
Arst5g02293 308 ProSiteProfiles NAC domain profile. 12 164 IPR003441 GO:0003677|GO:0006355
Arst5g02293 308 MobiDBLite consensus disorder prediction 178 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02293 Arst-Chr5 47020782 47022226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02293 7 230 NAC Transcription Factor Family AT1G69490 71.239 1.61e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst5g02293 NAM 3.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02293 - - adu:107489303 624.78