Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02155 ATGAGTCGCAAGAGAGAGAAACCCTCTTACACTTCTTCCCGCCACGCCCCCTACCCGAAGCGCCGCCGCCCACCGCCGGAGACCGTGCTTCAGGAGCCGGAGGACCGACCATCCTCGAGGCCTGCGCCCCCGTCCGCGGTGGTCATTATGGGCCTTCCCAACGACTGCTCCGTCCTTGACCTCAAGTCCCGCTTCGAGATCTACGGCCCCATTGCTCGCATTCGCATCGACGGCGACGCGGTCGGATATGTCACCTACCGGACCAAGGACTCCGCCGACGCCGCTATCGCCGCCGGCGCCGACCCGTCCTTTGGAATTACTCTTCACTCCAAAAAGGTTCAGGTGTTGTGGGCAACTGACCCTCTAGCCATGTGGAGGGAAGGAATTGGTAATAACAACAAGGACAAAGGATCAATGTCGAAGCTTGTGCGTGCTGAGGTACCTTTGAGAAGACATGGAAGGGGTAATAGACTTGCTTCAGCTATAGGCAATACCAGAACCAGTGTCGATAACGCAGGTAGCTCGGTTCTTGAAGTACCTTTCAAGGGAAGAGAAATTGTTGCTTATGATGATATCCTCTGA 582 0.5619 MSRKREKPSYTSSRHAPYPKRRRPPPETVLQEPEDRPSSRPAPPSAVVIMGLPNDCSVLDLKSRFEIYGPIARIRIDGDAVGYVTYRTKDSADAAIAAGADPSFGITLHSKKVQVLWATDPLAMWREGIGNNNKDKGSMSKLVRAEVPLRRHGRGNRLASAIGNTRTSVDNAGSSVLEVPFKGREIVAYDDIL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02155 193 PANTHER GEO13361P1-RELATED 43 148 - -
Arst5g02155 193 SUPERFAMILY RNA-binding domain, RBD 20 129 IPR035979 GO:0003676
Arst5g02155 193 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 47 97 IPR000504 GO:0003723
Arst5g02155 193 MobiDBLite consensus disorder prediction 1 45 - -
Arst5g02155 193 Gene3D - 1 122 IPR012677 -
Arst5g02155 193 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 45 120 IPR000504 GO:0003723
Arst5g02155 193 MobiDBLite consensus disorder prediction 20 34 - -
Arst5g02155 193 SMART rrm1_1 46 116 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02155 1 193 Homeobox Transcription Factor Family AT1G27050 52.632 1.28e-57 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02155 - - gmx:106797175 265.774