Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02132 ATGGCAACTGAAACCATCAACAAAGGCGAATTCATAATTGAGCATATTGGAGAAGTAATTGATGACGCTTTATATGAAAAAAGGCTTTGGGACATGAAATATGGGGGTGTACAGAATTTTTACATATGTGAGATTCGTAAAGATTTTACTATAGATGCAACCTTCAAAGGAAATATGGCTTGCTTCTTAAACCATGGTTGTGATCCTAATTGTGTTCTCGAGAAGTGGCAAGTAGATGGTGAAACGCGAGTTGGTGTATTTGCTTCCCATACAATAGAAATGGGAGATCCCTTGACATATGATTACAGATTTGTGCAATTTAGACCTGAGGTAAAATACCAATGTGGTGCCCCAAATTGTCGAGGGATTTTAGGGGTGAAAAAGAAAATTGTGAAGTTAGATATTTGTTGGGGTTGGGGATCAAAGCATAAGAGAACTTCAGCTGCATGTCCTGCCATAGAAATATAA 468 0.3782 MATETINKGEFIIEHIGEVIDDALYEKRLWDMKYGGVQNFYICEIRKDFTIDATFKGNMACFLNHGCDPNCVLEKWQVDGETRVGVFASHTIEMGDPLTYDYRFVQFRPEVKYQCGAPNCRGILGVKKKIVKLDICWGWGSKHKRTSAACPAIEI 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02132 155 Pfam SET domain 2 102 IPR001214 GO:0005515
Arst5g02132 155 ProSiteProfiles SET domain profile. 1 103 IPR001214 GO:0005515
Arst5g02132 155 Gene3D SET domain 1 134 IPR046341 -
Arst5g02132 155 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 2 154 IPR025787 -
Arst5g02132 155 SUPERFAMILY SET domain 2 122 IPR046341 -
Arst5g02132 155 PANTHER SET DOMAIN PROTEINS 2 137 - -
Arst5g02132 155 SMART set_7 1 109 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02132 Arst-Chr5 32773969 32778434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02132 2 125 C2H2 Transcription Factor Family AT2G23740 35.172 2.57e-15 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst5g02132 SET 5.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02132 - - adu:110281087 335.88