Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02107 ATGTCGCCGGAAAGTGACATCACGATGCCATCTCCGGCATCTTTCCGTCTCCGGTGGGATGTGTTCCTGAGCTTCCGCGGCTCCGACACCAGGGAGGCCTTCACGGAGGACCTCCACGGCGCTCTCGAAGCCGCTGGCGTGCGCGCCTTCATCGACAACGAAGGATTACAGCGTGGCGACTCGATCTCGCCGAGTCTGGTGGAAGCAATCGCGGATTCCGCCGCCGCCATTGTTATTCTCTCGCCCGACTACGCTTCCTCGCACTGGTGCCTTGAGGAGCTGGCGAAGATCTGCGAGTGCGGTTGGAAGCTGGTGCTGCCCGTTTTCTACCGGGTTGACCCGTCTCATGTCCGAAAACAGAAGGGACCTTTCGAGAAGGCGTTTCGGTTGCACGAAGAGAGTGAGAGGTTTAGGAATAAGGTTGCCAGTTGGAGGAGTGCTATGAACAAAGTTGGTGGAATTGCTGGTTGGGTTTTTGGTGATCATAATAGCAACAAGGATCAGTTAATTCGAGTTTTGGTGCAAACGGTTTTGAAGCAGATGAGGAATACTCCATTGACAGTGGCACAGTATACAGTTGGGCTTGATGACAGAGTTGCAGAGTTAAGGAAGTTACTTGACGTAAGATCCAGTGATGTCAAAGTGATAGGATTGTATGGAATGGGAGGGGTCGGTAAGACAACTCTGGCCAAGGGACTCTTCAACAGCCTTGTTGATCATTTTGATAGACGCAGCTTCATCTCAAATGTTAGAGAAGTTGCAAACAATGAAGATGGTATGGTTTCACTCCAGGGAAGAATTCTTGGTGATCTTTCCCCTGGAACTGAGAATCCCATCAATGATGTTAATGCTGGTATTTCTGCGATCAAAAGAATTGTAGAGGAAAATCGAGTTCTGGTTTTTCTTGATGATGTTGATGATGTAAAACAGCTTGACTCATTAATTGGTAAGAGAGAATGGTTTTCTAAAGGAAGCTGTGTTGTGATTACTACACGGGACAGAGCAGTTTTACAGGAGAGGTATGTTAATGTGAAGTATGAGGTGAAGGAATTGAAAGAGTCTCAAGCACTGGAATTGTTCTGTTACCATTCCGAGTGGAAAGACACACTGTTGAAGCTTAGAGATATTCGGCCGGATAAACTTCAAGGTGCTCTGAAGATCAGCTTCGATGCCTTGGATGAACAAGACAAGTGTGTGTTCCTTGACATTGCTTGCTTGTTTGTGCAAATGGAAATGAAGAGGGATGATGTGGTTGATATACTAAATGGTTGTGGTTTTAGAGGGGAGATTGCAATAACGGTCTTAACTACAAAGTGTTTAATTAAGACCATTAAGGATGGTGTAGTGTGGATGCATGATCAGGTTAGAGACATGGGAAGGCAAATTGTTCAAAATCAAAGTATTCTAGATTGTGGTTCACGTAGCAGGTTATGGGATCGTCATGAAATCTTGGGTGTCTTGAAGAATAAGAAGGGAACAAGAAAAGTTGAAGGTATTGTACTTGATTGTGTAAAGAGGAGTCTGGCTAAACCTAGAGACCGTACTGCTGAAGAGATTACCTGGGACAATTTTCGACAAATGCCAGGTTACAAAACAGCATCAGCATATATGAAGGCAAAGTATAAGAACTATGTGGAGCATAGAGGAGAGAAAGCAAAAAAATTTACACTTGATACAAAGGACTTCCAACCTATGGTTTCCTTAAGGTTGCTTCAAATTAATTATTCAAGACTTGAAGGACAGGGCAAATTTCTGCCTCAAGGAGTAAAGTGGTTACAATGGAAACAATGTCCTCTAAAGAACATGTCTTCTTCCTATTATCCATTGGAACTTGCCGTGCTTGATCTCTCGGAAAGCAAGATTGAAACACTGTGGGGAAAGCATCATAACAAGGTAGCTGAGTGCCTGATGGTTTTAAACCTCTCCAGTTGCCACCATTTAGTTGCAATTCCGGATTTAACTGGTTACCATTGTCTAAAAAAGATTGTATTGGAGAACTGCACTGCTTTAACTAGGATTCATGAATCAGTTGGAAATTTAAGTACCCTGGTTCACTTGAACTTAGGCACATGCTATAACCTTGTTGAGTTACCTAGTGATGTCTCTGGGTTGAAACATCTCGAGGACTTGATTCTTTCTGGATGTTGGAAATTGAAAGCATTACCAAAGGACCTAAGCTGCTTGGTCTCTTTAAGAAAGCTTCTCATTGATGAGACTGCCATAACTGTGTTACCTGATTCCATCTTCCACCTCACCAAACTGGAAAAGTTGAGTTGCAGTGGTTGCCGTCTTTTGAGAAGGATACCCACCAGCATTGGGAAACTCTGTTCTCTGCGAGAATTATCACTAAACCATACAGCTTTGGATGAATTACCTGATTCTATTGGATGTTTGCAGAATCTTGAGAAACTTGGTTTGGTTGGGTGTAAGTCCCTCTCTATTATTCCAGATTCTGTTGGGACACTAATTTCATTGACACATTTGTTTTTGGATGTCAGTGGAATCAAAGAGTTGCCTGATTCTATTGGTTCTTTATCATATCTAAGGCAATTGTCTGTTAGTGGCTGCACTTCTCTTGGTGAATTGCCTATGTCAATAAAGGCATTAGTCTCTCTTGTTGAGCTTCATTTAGATAAGACACCAATTACTATTTTGCCTGAACATATAGGGGCCATGAAAATGCTACAAAAGCTTGAGATGGCGAATTGTAAAGATCTCAAGTTTCTACCTGCATCGATCGGAGACATGTCGGCCCTTACTGCCTTGGACATGTATAACACTAATATTACTGAATTGCCAGAGTCAATTGGAATGTTGGAAAATCTTATTCATTTGAGGATAGACATGTGCAAAGAGCTCAAAAGGCTTCCAAAATCCTTGGGAAATTTGAAATCTCTATGCTGGTTACAGATGAAGGAAACAGCAGTTACACAGCTACCTGATAGCTTTGGGATGCTTTCAAGATTGGTAAAATTAGACATGGAAAGAAGGTATTACCTCAATATGGTTGGAGACAAGAATACTGAAGAACCCAATTCAGTTGGAATCTTAAGAAGTTTTTGTAAACTAACCTTGTTGCAAGAGCTAAATGCACATGGATGGAGAATAGCTGGAAAAATCCCAGATGATTTTGAAAAGTTGTCATCACTAGAAACTCTAAATTTATGCCACAATAATATTATCAGCCTTCCAGCCAGCATGAGAGGCCTTTCCTGTCTAAAAAAGCTTTTGTTGTCAAATTGCACTCAGCTCATTTTTCTGCCATCTCTTCCCTCTAGCTTAGTAGAGGTCGATGTTGCGAACTGTATTGCATTAGAGCGCATATCTGATATTTCAAACTTAGATAACATAGAGGAGTTGAACCTTACAAATTGTGAAAAGCTGGAAGACATACCAGGTATTGAGCACTTAAAGTCCTTGAGAAGATTGTACATGAGTGGATGCATTGGATGCTCCCATGCTGCTGCGATGAGAAGATTTTCCAAGGATCTGCTTAAAAATTTACGGATTTTGATTATGCCTGGAAGCAAAGATATTCCAGATTGGATTTCAGGAGAATCAATTATCTTTTCCAAGAGAAGGAACCGTGAGCTTAAAGGTATTATTTGTGCCGGTGTACTCTCTTTCGACGGTATACCTGAAAACCAAAGAGATGCCTTGCAGTTAGTGGATGTTCAGGCAAAAGTCTTCAATTTGACTGATAATGTATATAGCACTACGTTTCGCCTGTTAGGTGTACCTAGGACAAATGAAGACCACATCTTCTTGCACAGATTTGGAGCTCATACTTCATTGGTTCACCAGTTGAAAGATAAATACACCTTGCATTTGACAAAGCGGAATGCACCCTTTGTTCAGGAGTTGAAGCTGAAGAGCTGCGGAATTCATTTGGTCTTCGAAGGTGATGATGACTATGAAGGAGATGAAGAATCACTAGATGAAAGCCAATATTCGGTGTCACAAAAATTAGCCAAGTTCTTCAACTCTTGTTATTGCCCGAGATCGCATTTGCATGTGAATACAAGTACGTCAAATGAACCACTTGAGATCGGGAGGAGTATAACAAGAAGCACAGTTCCAGACCCATGGCTTCGTTCCATCCTTTTTAGTGCGACATTTTTGTGTGCTTTGAGCTATTTATACTTAAGATACCTCAATTTTTGA 4164 0.4179 MSPESDITMPSPASFRLRWDVFLSFRGSDTREAFTEDLHGALEAAGVRAFIDNEGLQRGDSISPSLVEAIADSAAAIVILSPDYASSHWCLEELAKICECGWKLVLPVFYRVDPSHVRKQKGPFEKAFRLHEESERFRNKVASWRSAMNKVGGIAGWVFGDHNSNKDQLIRVLVQTVLKQMRNTPLTVAQYTVGLDDRVAELRKLLDVRSSDVKVIGLYGMGGVGKTTLAKGLFNSLVDHFDRRSFISNVREVANNEDGMVSLQGRILGDLSPGTENPINDVNAGISAIKRIVEENRVLVFLDDVDDVKQLDSLIGKREWFSKGSCVVITTRDRAVLQERYVNVKYEVKELKESQALELFCYHSEWKDTLLKLRDIRPDKLQGALKISFDALDEQDKCVFLDIACLFVQMEMKRDDVVDILNGCGFRGEIAITVLTTKCLIKTIKDGVVWMHDQVRDMGRQIVQNQSILDCGSRSRLWDRHEILGVLKNKKGTRKVEGIVLDCVKRSLAKPRDRTAEEITWDNFRQMPGYKTASAYMKAKYKNYVEHRGEKAKKFTLDTKDFQPMVSLRLLQINYSRLEGQGKFLPQGVKWLQWKQCPLKNMSSSYYPLELAVLDLSESKIETLWGKHHNKVAECLMVLNLSSCHHLVAIPDLTGYHCLKKIVLENCTALTRIHESVGNLSTLVHLNLGTCYNLVELPSDVSGLKHLEDLILSGCWKLKALPKDLSCLVSLRKLLIDETAITVLPDSIFHLTKLEKLSCSGCRLLRRIPTSIGKLCSLRELSLNHTALDELPDSIGCLQNLEKLGLVGCKSLSIIPDSVGTLISLTHLFLDVSGIKELPDSIGSLSYLRQLSVSGCTSLGELPMSIKALVSLVELHLDKTPITILPEHIGAMKMLQKLEMANCKDLKFLPASIGDMSALTALDMYNTNITELPESIGMLENLIHLRIDMCKELKRLPKSLGNLKSLCWLQMKETAVTQLPDSFGMLSRLVKLDMERRYYLNMVGDKNTEEPNSVGILRSFCKLTLLQELNAHGWRIAGKIPDDFEKLSSLETLNLCHNNIISLPASMRGLSCLKKLLLSNCTQLIFLPSLPSSLVEVDVANCIALERISDISNLDNIEELNLTNCEKLEDIPGIEHLKSLRRLYMSGCIGCSHAAAMRRFSKDLLKNLRILIMPGSKDIPDWISGESIIFSKRRNRELKGIICAGVLSFDGIPENQRDALQLVDVQAKVFNLTDNVYSTTFRLLGVPRTNEDHIFLHRFGAHTSLVHQLKDKYTLHLTKRNAPFVQELKLKSCGIHLVFEGDDDYEGDEESLDESQYSVSQKLAKFFNSCYCPRSHLHVNTSTSNEPLEIGRSITRSTVPDPWLRSILFSATFLCALSYLYLRYLNF 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02107 1387 Gene3D - 14 180 IPR035897 -
Arst5g02107 1387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 403 IPR027417 -
Arst5g02107 1387 Coils Coil 334 354 - -
Arst5g02107 1387 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 964 1141 IPR044974 GO:0006952
Arst5g02107 1387 Pfam NB-ARC domain 199 363 IPR002182 GO:0043531
Arst5g02107 1387 SUPERFAMILY L domain-like 863 1174 - -
Arst5g02107 1387 Gene3D - 181 346 IPR027417 -
Arst5g02107 1387 Gene3D Ribonuclease Inhibitor 743 837 IPR032675 -
Arst5g02107 1387 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 183 - -
Arst5g02107 1387 Pfam TIR domain 19 183 IPR000157 GO:0007165
Arst5g02107 1387 ProSiteProfiles TIR domain profile. 17 178 IPR000157 GO:0007165
Arst5g02107 1387 SMART LRR_typ_2 1047 1070 IPR003591 -
Arst5g02107 1387 SMART LRR_typ_2 916 939 IPR003591 -
Arst5g02107 1387 SMART LRR_typ_2 775 798 IPR003591 -
Arst5g02107 1387 SMART LRR_typ_2 728 751 IPR003591 -
Arst5g02107 1387 SMART LRR_typ_2 869 892 IPR003591 -
Arst5g02107 1387 SMART LRR_typ_2 822 845 IPR003591 -
Arst5g02107 1387 Gene3D Ribonuclease Inhibitor 1008 1192 IPR032675 -
Arst5g02107 1387 Gene3D Ribonuclease Inhibitor 838 1007 IPR032675 -
Arst5g02107 1387 SMART till_3 18 154 IPR000157 GO:0007165
Arst5g02107 1387 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 157 IPR035897 -
Arst5g02107 1387 PRINTS Disease resistance protein signature 1112 1128 - -
Arst5g02107 1387 PRINTS Disease resistance protein signature 215 230 - -
Arst5g02107 1387 PRINTS Disease resistance protein signature 292 306 - -
Arst5g02107 1387 SUPERFAMILY L domain-like 451 903 - -
Arst5g02107 1387 Gene3D Ribonuclease Inhibitor 554 742 IPR032675 -
Arst5g02107 1387 ProSiteProfiles Leucine-rich repeat profile. 1049 1070 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02107 Arst-Chr5 31391747 31400696 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02107 720 945 WRKY Transcription Factor Family AT4G12020 30.739 2.17e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02107 - - adu:107489074 2742.61