Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02084 ATGACTATGAAAAGGATCCGGAAGGAAGCGATCGGTGGCGTCTCCGTCAAGCTCAACGCCGGATGCATCGCTGGCGTCGGTGGTAAAGATTCACTTCCTGGGTCATGCTTTCATCGTATTATTAAGGGTTTTATGATCCAAGGAGGCGATATTTTTGCTGGAGATGGTACTGGAGGAGGATCTATATATGTTAAGTTTGAAGATGAAATTTTTGAATTGAAGCATGAAAGGAAAGGGATGCTACCAATGGCAAACTCTGGTCCAAACACGAATGGATCTCAGTTTTTTATCACCACTACTCGAACTTCTCATCTAGATGGTAAGCATGTGGTATTTGGGAAAGTAGTTAAGGGAATGGGAGTGGTCCATTCGATTGAGCATGTTACTACCAGAGATGATGACCGTCCTACTCTTGATGTGAAAATTGTGGATTGTGGAGAAATTCCTAAAGGAGAAGATGATGGAATCTCCAACTTTTTCAAAGATGCTAATACTTATCCTGATTGGCCAGCAGATCTTGATGAGAGTCCTAATGAACTTGAATGGTGGATGGAACCTTTTAACAACATTAAAACTTTTGGTAACGATTATTACAAGAAACAAGATTACAAAATGGCTCAAAAGAAGTATCGAAAGGCTTTGTGCTACCTAGATATTTGTTGGAAAAAAGAGGGGATTGATGAAGAGAAAAGTTCAGGTTTGAGAAAGACGAAGTCACAGATTTTTACAAACAGCTCTGCTTGTAAATTGAAATTAGGCGATCTCAAAGGAGCATTGGATACCGAATTTGCAGTGCGAGCAAATCTGAACCTACATATTTGTACACTCTGGAAAAGGGTTATTTCTTGTTACCTGAAAGTGCAAAGTTCCGTCATAATGTACGAACTGTTAATGTTAGCATATCAGCTTGGCACTCATGCTTTGGAAATAGGTGGCAGCAACTACTCATAA 951 0.3996 MTMKRIRKEAIGGVSVKLNAGCIAGVGGKDSLPGSCFHRIIKGFMIQGGDIFAGDGTGGGSIYGXKFEDEIFELKHERKGMLPMANSGPNTNGSQFFITTTRTSHLDGKHVVFGKVVKGMGVVHSIEHVTTRDDDRPTLDVKIVDCGEIPKGEDDGISNFFKDANTYPDWPADLDESPNELEWWMEPFNNIKTFGNDYYKKQDYKMAQKKYRKALCYLDICWKKEGIDEEKSSGLRKTKSQIFTNSSACKLKLGDLKGALXDTEFAVRANLNLHICTLWKRVISCYLKVQSSVIMYELLMLAYQLGTHALEIGGSNYS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02084 318 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 147 IPR002130 GO:0000413|GO:0003755
Arst5g02084 318 FunFam Peptidyl-prolyl cis-trans isomerase CYP19-2 18 149 - -
Arst5g02084 318 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 32 149 - -
Arst5g02084 318 Gene3D - 19 155 IPR029000 -
Arst5g02084 318 SUPERFAMILY TPR-like 190 288 IPR011990 GO:0005515
Arst5g02084 318 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 148 IPR002130 GO:0000413|GO:0003755
Arst5g02084 318 Gene3D - 180 264 - -
Arst5g02084 318 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 108 123 IPR002130 GO:0000413|GO:0003755
Arst5g02084 318 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 80 95 IPR002130 GO:0000413|GO:0003755
Arst5g02084 318 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 95 107 IPR002130 GO:0000413|GO:0003755
Arst5g02084 318 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 37 49 IPR002130 GO:0000413|GO:0003755
Arst5g02084 318 SUPERFAMILY Cyclophilin-like 31 151 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02084 Arst-Chr5 30622172 30626588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02084 34 146 U-box Gene Family AT5G67530 48.246 3.69e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02084 K05864 - gmx:100804110 406.757