Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02069 ATGAAGAGGTCTAGGGACGATATTTTCGCGAGTCCTCAACTTAAACGGCCTATAGTGTCTTCTCGAGGAGAAGCGTCCGGGCAACCCCAGATGATGAATGGAGGTGCTGTTATTCAGAAGCTAACTACAAATGATGCATTGGCATATCTCAAGGCAGTGAAGGATATATTTCAGGATAAGAGGGACAAGTATGATGACTTTTTGGAAGTCATGAAAGATTTTAAGGCTCAAAGAGTTGATACTGCAGGCGTGATAGCAAGGGTTAAACAGCTCTTTAAAGGGCACAGAGACTTGCTTTTGGGATTCAACACCTTCTTGCCAAGGGGTTATGAAATCACACTTCCACTGGAGGATGAACAACCTGCCCCAAAGAAGCCTGTTGAATTTGAAGAAGCGATTAATTTTGTGAACAAAATTAAGACCCGGTTTCAAGGTGATGATCGTGTTTACAAGTCATTTCTGGACATATTAAATATGTACAGAAAGGAAAGCAAGTCTATAACAGATGTCTACCAGGAGGTTGCTGCACTTTTCCAAGAGCATCCGGATCTTCTTGATGAGTTTACTCATTTTCTCCCGGACACTTCCTCAGCAGCCTCTGCTCATTATATTTCTGCTAGAAATTCTATGCTTCGTGATAGGAGCTCTGCAATGCCAACTGTACGGCAAATGCATGTTGAGAAGAGAGAAAGGACTATGACCTCACATGGTGATCGTGACCTCAGTGTTGACCGTCCTGACCCTGATAATGACAGAGGTTTGATGAGGGCAGAAAAGGATCAGAGGAGACGTCTAGAGAAGGATAAGGAATGCAGAGAGGAGAGAGATAGGAGAGAACGTGACAGAGATGATAGAGATTATGAGCATGATGGTGGTCGAGATAGGGAAAGGTTCTCCCATAAACGGAAATCTGATCGTAGGGCTGAAGACTCTGGAGCCGAACCATTGCTCGATGATGAACATATTGGCATGTATAGCCAGGAGCTTGCTTTCTGTGAAAAGGTCAAAGAGAAATTACGAAATCCTGATGACTACCAGGAATTTTTGAAGTGTTTGCATATTTACAGCAGGGAAATAATTACCAGACATGAATTGCAGTCATTGGTTGGTGATTTACTGGGGAAATATCCAGATCTTATGGAGGGGTTTAATGAATTTTTGATACAATCTGAAAAGAATGATGGTGGATTCCTTGCTGGTGTCATGAATAAAAAGTCCTTATGGAGTGACGGACAAAGGCCGAAATCTGTGAAGGTTGAAGACAGAGATCGTGATCGAGACCGTTGTAGGGATGATGGCATGAAAGAAAGGGATCGTGAATTCCGAGAAAGGGACAAATCCACTGCCCCCGCCAACAAGGATGTTTCAGGTCCTAAGATGTCCATATATCCCAGCAAGGATAAGTATTTGTCAAAGCCTATAAATGAGCTGGACCTTTCTAACTGTGATCAATGCACTCCGAGCTATCGTCTATTGCCAAAAAATTACCCAATACCTGTAGCTAGCCAGAGAACAGAACTTGGTGCAGAAGTATTAAATGATCACTGGGTGTCTGTTACTTCAGGAAGTGAGGATTATTCCTTTAAACATATGCGCAAAAATCAGTATGAAGAGAGCTTGTTCAGATGTGAAGATGACAGGTTTGAACTTGATATGTTGCTAGAGTCTGTAAATGCAACTACTAAGCGAGTGGAAGAGCTATTAGAAAAGGTCAATAATAATATAATCAAAGGAGACAGTCCAATTCGTATTGAGGAGCACTTAACAGCCTTAAATCTTAGGTGCATTGAACGATTATATGGTGACCATGGGCTAGATGTGATGGATGTGTTACGGAAAAATGCATCTCTGGCTTTGCCAGTGATATTAACCCGCTTGAAGCAGAAACAAGATGAATGGGCAAGGTGTCGTGCTGATTTTAATAAAGTCTGGGCTGAAATATATGCCAAAAATTATCATAAATCTCTTGATCACCGTAGCTTCTACTTTAAACAACAGGATACAAAAAGCTTGAGTACTAAAGCATTACTGGCCGAAATCAAAGAAATCAGTGAGAAGAAACGCAAAGAAGATGATGTTCTTCTTGCGATTGCTGCTGGAAATAGACGTCCTGTTCTTCCAAACCTTGAGTTTGAGTACACTGATTCTGATATTCATGAAGATCTGTATCAGCTTGTAAAATATTCTTGTGGAGAAATGTGTACAACTGAACAATTGGATAAAGTTATGAAGGTTTGGACAACATTTTTAGAACCCATTCTGTGTGTTCCTTCTCGGCCTCTGGGTGCCGAGGATACAGAAGATGTTGTCAAGGATAAGAATAATTCTGCCAAAAGTGGCACTGCAAGTGTTGCCGAGAGTGAGGGTAGTGCTGGTGCTGGTGCTATTGTAGTGAATCCTAAGCATATTAACACTTCTAGAAATGGGGATGAGTGTATGCCATTAGATCAATCAAATTCTAGCAAAGTATGGCAATCAAATGGTGACAGTGGTGCAAAAGATGATAAATGTCTTGATTCAGACCGCACTCTGCATAAAACTGAAACTTCAGGCACTAATACACAGCATGTTAAAATTAATACTAGTTCATTCACACCCGATGAAATGTCAGGAGTCAATAAGCAAGACCACTCCAGTGAGCGGTTGGTGAATGCTAATGTTTCACCAGCATTAGGAGTGGAGCTAAGTAATGGAAGAACAAGCATGGATAATGCATCAGGAATCATTGCCACTAATCCGTCTAGACCTGGTAATATTTCTGGCGAAGGTGGAGTTGATTTACCTTCATCAGAGGGTGGTGATTCTACCAGACCAGGTACATCCACAAATGGGACCATCACAGAAGGGACCGAAGTTCACAGGTACCCAGAAGAATCAGTTCGGCAGTTAAAAAGTGAAAGAGAAGAGGGCGAGTTGTCCCCAAATGGAGACTTTGAAGAGGATAACTTTGCTGTTTATGGAGATACTGGTTTGGATGCAGTCCATAAGGGGAAGGATGGCGGTTCGAGTCAGCAATACCAAAACAGAAATGGAGAACAAGCTTTAGGTGAAGTTAGAGGAGAGAATGATGTTGATGCTGACGATGAAGGTGAGGAAAGTCCACACAGGTCATCTGAGGACAGTGAGAATGCTTCCGAGAATGTTGATGTTTCTGGAAGCGAGTCTGCTGATGGTGAGGAATCCCGAGAAGAGCACGAGGATGGGGAAAATGATAACAAAGCTGAGAGTGAAGGTGAAGCTGAAGGAATGGCTGATGCCCATGATGTTGAAGGAGATGGAACCTCCTTGCCATTTTCAGAGCGCTTCCTATTAACTGTAAAGCCACTGGCGAAGCATGTTCCCCCAGCGTTACATGAGAAAGAAAGGACTTCTCGAATTTTTTATGGAAATGATTCCTTTTACGTCCTGTTTAGACTTCATCAGACATTGTATGAGAGGATACAATCAGCAAAGATTAACTCATCATCTGCTGAAAGGAAATGGGGGGCTTCAAATAATACGGGTTCTACTGATCAATACAACAGGTTCATGAATGCGCTCTACAATTTGCTGGATGGTTCATCTGATAATACAAAATTCGAGGATGATTGTCGAGCCATTATTGGAACTCAGTCATATCTCTTATTCACTTTAGACAAGCTGATTTATAAGCTTGTTAAACAGCTTCAAAATGTTGCCACTGATGAGATGGATAACAAGCTTCTCCAATTATATGCCTATGAGAAATCAAGAAAACCAGGAAGATTTGTTGACGCAGTTTATCATGAAAATGCCCGTGTTCTTCTTCATGAAGAGAACATATACCGAATTGAATATTCACCTGGACCTAAGAAATTGTCTCTTCAACTGATGGACTATGGACATGATAAGCCTGAAGTGACTGCCGTGTCAATGGACCCCAACTTTTCAGGCTATTTGTACAACGAATTTTTTTCTGTTGTCTCTGACAAAAAGGAAAAGTCTGGAATTTTCTTGAAGAGGAACAAACGTAGATATGCCTGTGGTGATGACATTTCAAGCGAGGCTGTGGAAGGACTACAAGTTATTAATGGTCTTGAGTGTAAGATATCCTGCAGTTCATCCAAGGTGTCATATGTTTTAGATACGGAAGATTTTTTGTTCCGGAAGAGAAAGAATAGGGCAAAGTCTTTAACCATTAGTTCGAGAAGAGCACAACGGTTCCACAAATTGTTTTCCCTTGCATGCTGA 4209 0.4155 MKRSRDDIFASPQLKRPIVSSRGEASGQPQMMNGGAVIQKLTTNDALAYLKAVKDIFQDKRDKYDDFLEVMKDFKAQRVDTAGVIARVKQLFKGHRDLLLGFNTFLPRGYEITLPLEDEQPAPKKPVEFEEAINFVNKIKTRFQGDDRVYKSFLDILNMYRKESKSITDVYQEVAALFQEHPDLLDEFTHFLPDTSSAASAHYISARNSMLRDRSSAMPTVRQMHVEKRERTMTSHGDRDLSVDRPDPDNDRGLMRAEKDQRRRLEKDKECREERDRRERDRDDRDYEHDGGRDRERFSHKRKSDRRAEDSGAEPLLDDEHIGMYSQELAFCEKVKEKLRNPDDYQEFLKCLHIYSREIITRHELQSLVGDLLGKYPDLMEGFNEFLIQSEKNDGGFLAGVMNKKSLWSDGQRPKSVKVEDRDRDRDRCRDDGMKERDREFRERDKSTAPANKDVSGPKMSIYPSKDKYLSKPINELDLSNCDQCTPSYRLLPKNYPIPVASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNATTKRVEELLEKVNNNIIKGDSPIRIEEHLTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQDEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISEKKRKEDDVLLAIAAGNRRPVLPNLEFEYTDSDIHEDLYQLVKYSCGEMCTTEQLDKVMKVWTTFLEPILCVPSRPLGAEDTEDVVKDKNNSAKSGTASVAESEGSAGAGAIVVNPKHINTSRNGDECMPLDQSNSSKVWQSNGDSGAKDDKCLDSDRTLHKTETSGTNTQHVKINTSSFTPDEMSGVNKQDHSSERLVNANVSPALGVELSNGRTSMDNASGIIATNPSRPGNISGEGGVDLPSSEGGDSTRPGTSTNGTITEGTEVHRYPEESVRQLKSEREEGELSPNGDFEEDNFAVYGDTGLDAVHKGKDGGSSQQYQNRNGEQALGEVRGENDVDADDEGEESPHRSSEDSENASENVDVSGSESADGEESREEHEDGENDNKAESEGEAEGMADAHDVEGDGTSLPFSERFLLTVKPLAKHVPPALHEKERTSRIFYGNDSFYVLFRLHQTLYERIQSAKINSSSAERKWGASNNTGSTDQYNRFMNALYNLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQNVATDEMDNKLLQLYAYEKSRKPGRFVDAVYHENARVLLHEENIYRIEYSPGPKKLSLQLMDYGHDKPEVTAVSMDPNFSGYLYNEFFSVVSDKKEKSGIFLKRNKRRYACGDDISSEAVEGLQVINGLECKISCSSSKVSYVLDTEDFLFRKRKNRAKSLTISSRRAQRFHKLFSLAC 1402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02069 1402 Coils Coil 255 275 - -
Arst5g02069 1402 PANTHER SIN3B-RELATED 40 1271 IPR039774 GO:0003714
Arst5g02069 1402 SUPERFAMILY PAH2 domain 325 387 IPR036600 GO:0006355
Arst5g02069 1402 Gene3D Paired amphipathic helix 124 196 IPR036600 GO:0006355
Arst5g02069 1402 Pfam Paired amphipathic helix repeat 343 387 IPR003822 GO:0006355
Arst5g02069 1402 Pfam Paired amphipathic helix repeat 149 192 IPR003822 GO:0006355
Arst5g02069 1402 Pfam Paired amphipathic helix repeat 62 106 IPR003822 GO:0006355
Arst5g02069 1402 MobiDBLite consensus disorder prediction 1029 1043 - -
Arst5g02069 1402 SUPERFAMILY PAH2 domain 123 194 IPR036600 GO:0006355
Arst5g02069 1402 MobiDBLite consensus disorder prediction 409 462 - -
Arst5g02069 1402 ProSiteProfiles PAH domain profile. 39 109 IPR003822 GO:0006355
Arst5g02069 1402 ProSiteProfiles PAH domain profile. 125 195 IPR003822 GO:0006355
Arst5g02069 1402 FunFam Paired amphipathic helix protein Sin3 45 107 - -
Arst5g02069 1402 Pfam C-terminal domain of Sin3a protein 1127 1373 IPR031693 -
Arst5g02069 1402 Coils Coil 550 574 - -
Arst5g02069 1402 FunFam Paired amphipathic helix protein SIN3 321 392 - -
Arst5g02069 1402 SUPERFAMILY PAH2 domain 39 108 IPR036600 GO:0006355
Arst5g02069 1402 MobiDBLite consensus disorder prediction 933 949 - -
Arst5g02069 1402 SMART hdac_interact2seq4b 481 581 IPR013194 -
Arst5g02069 1402 MobiDBLite consensus disorder prediction 1066 1088 - -
Arst5g02069 1402 MobiDBLite consensus disorder prediction 211 315 - -
Arst5g02069 1402 MobiDBLite consensus disorder prediction 766 838 - -
Arst5g02069 1402 MobiDBLite consensus disorder prediction 905 1094 - -
Arst5g02069 1402 MobiDBLite consensus disorder prediction 223 315 - -
Arst5g02069 1402 MobiDBLite consensus disorder prediction 951 972 - -
Arst5g02069 1402 Gene3D Paired amphipathic helix 45 107 IPR036600 GO:0006355
Arst5g02069 1402 FunFam Paired amphipathic helix SIN3-like protein 124 195 - -
Arst5g02069 1402 Pfam Sin3 family co-repressor 484 574 IPR013194 -
Arst5g02069 1402 Gene3D Paired amphipathic helix 323 391 IPR036600 GO:0006355
Arst5g02069 1402 ProSiteProfiles PAH domain profile. 318 390 IPR003822 GO:0006355
Arst5g02069 1402 MobiDBLite consensus disorder prediction 414 450 - -
Arst5g02069 1402 MobiDBLite consensus disorder prediction 801 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02069 Arst-Chr5 30120605 30132600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02069 28 144 WRKY Transcription Factor Family AT4G12020 50.427 5.81e-25 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst5g02069 Sin3a_C 3.1e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02069 K11644 - gmx:100811928 2222.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g02069 5 30120605 30132600 Arst5g02069 5 30120605 30132600 ECH