Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02056 ATGGCTCTGAAGAATGCTGTGCTTCTTCTGAGCCTTCTCTTTGTTTCACATATTTTTTTGATACAAACATGTTATTCCCAAACCAATTTTGATCCTCAGAACATTGAAACTTTCTATCCAATTGAAACAGCAGAAGAACCATCATTACCAACAATAAATCCGGAAGAATCACCGCCATCTCCATCACCATCATCAAACAGTAAAGTAGCGAAGGCTGTAGCTGCAACTGCAGCATGCACACTAGCTGTTTGTGGAATTGTGTTCTTCTTAGGTCTAAGGTGCTTCAGAGCAAAGAAGAGAATTGACATAACCAACACTACTACAACAACCATGGCTTCTTCTGCAACACATAGAGATCATAGGAATGTTGTGGTGCCTCTGCCTCAGCCTCAACCTCAACCTCAGGTGAGTGTGTATGAGAGAATGGAAGGTAACATAAAAGGGCTGATTGTTGATGAGAATGGTTTGGATGTTGTATATTGGAAAAGGCTTCAAGATGGTAAGAACTCAAAAGAGGTATTGGGTAAAAGTCACAAAAACAAAGAAAACGATCACGAAGGATATTATGATCAAAGGACACAACCTGAATCTAATGTTCAAGAAACTCCTTTGCTAAGAGGGTTATCTTCAAATTCTTCACATTTGAATATATTTCCTGTAGAACCATACACTATTATGAAGATTCCACCACCTCATCCTCCTCCTCCAATTAATGGTTTTGATAAACTTGATTTTGTTAGCCATTCACAACCAAAACCACCCTCCATTTCTTCATCATCAACTCCTACACCACTTTCACCTTCCACTCCAAGAATCCAAGATAGAAAAAGTTCAGCACCTAAACTGCCGCCACCTCCACCACCTCCGCCACCAATTCCAAAGAGCCAAGCAGTGCCACCACCATGTCCTCCACCAGTACCAGAAAGAAAGAGCCAAGCACCTCCACCACAACCTCCTCCTCTTCCACCAATTACTGGTAGAAAGAGCCAAGCCCCGCCACCGCCGCCTCCACCGATTCCTTCTAGAAAGGGGCCACCAAAGGGAGGAAATCCAAAGTCATCATCAAAACCACCTCCTACCCCTATTGAAGCACCATCATACTCGAGAAAAGGCAAATCTAAAGATGAAGATATGCAAGAAACCAGCAATCGTCAAGTGAAACTGAAGCCTCTGCATTGGGATAAAGTCAATGCTAATCTTGATCACTCCATGGTTTGGGACAAAATTGACCGTGGCTCCTTCAGGGTCGATGATGATCTTATGGAAGCTCTCTTTGGCTATGTTGTTAACCACAACACCCCAAAAGCGAATGATTCAGGGAGTCCAAGCAAGGGTTCCTCTGCCTCAGCTCCATCAACAAAGGCATCCACCCTTCTTGACCCAAGAAAATCACAGAACACTGCCATTGTGTTGAAATCTCTTGCAATATCAAGAAAAGAAGTCTTTGATGCACTCCTTGATGGTCATGGCCTCAACACAGATACCATTGAAAAGCTTTCTAGAGTTGCTCCAACAGAAGAAGAGCAATCTCTAATACTCCAATACAGAGGAGATCCTGAAAACCTTCCTGCAGCGGAGTCCTTCCTGTATCATACTCTCAAAGCCGTTCCTTCGGCGTTTAAGCGCTTGAATGCCATGCTGTTCAGGCTGAACTATGATGCCGAGATTGTCGAAATCAAGGAGTTTCTGCAGACACTTGAGTTGGGATGTAAGGAGCTTAGGAACCAAGGAGTGTTCCTGAAGCTTCTTGAAGCAGTGCTTAAGGCCGGAAATCGCATGAATGCAGGTACTCATAGAGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTTAGGAAACTTTCTGATGTGAAGAGCACCGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAGGAAGTGGTCCGATCTGAAGGCAAACGTGCTGTTCTCAATCGAGACTACAGCGTGAGCCGAAGTAGCAGCAGAAGTAGAAGTAGCAGCAGTATTAGCAGTGGAAACACTGAGAATTCTGTTTCAGATGAACAAAGAAAAAGGGAATACATAATACTAGGATTGCCAATTGTTGGAGGGGTCAGTTCTGAGTTCTCCAATGTAAAGAAAGCAACACTAACAGATTACAAAAGTTTTGTTGGTTCAATCTCAGCACTTTCAGCAAGGATAGCTGAGATTCGAGAACTCGTTTTGAAGTGTGGAGGAAATGATAAAGGAGGGAATTTTGCAAGAGAAATGAACCGTTTTCTATCAGAAGCTGAGGAAGAAGTGAAATTGGTGAGTGAAGAACATGGAAGGGTGATGCAGCTTGTGAAGAAAACAACAGCTTATTATCAAGGAGGAGGGGCATGGAAAGAGAGTGAACAACCGCTTCAACTGTTTGAGATAGTGAAGGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGGAAGTGCACAAAGTAG 2460 0.4321 MALKNAVLLLSLLFVSHIFLIQTCYSQTNFDPQNIETFYPIETAEEPSLPTINPEESPPSPSPSSNSKVAKAVAATAACTLAVCGIVFFLGLRCFRAKKRIDITNTTTTTMASSATHRDHRNVVVPLPQPQPQPQVSVYERMEGNIKGLIVDENGLDVVYWKRLQDGKNSKEVLGKSHKNKENDHEGYYDQRTQPESNVQETPLLRGLSSNSSHLNIFPVEPYTIMKIPPPHPPPPINGFDKLDFVSHSQPKPPSISSSSTPTPLSPSTPRIQDRKSSAPKLPPPPPPPPPIPKSQAVPPPCPPPVPERKSQAPPPQPPPLPPITGRKSQAPPPPPPPIPSRKGPPKGGNPKSSSKPPPTPIEAPSYSRKGKSKDEDMQETSNRQVKLKPLHWDKVNANLDHSMVWDKIDRGSFRVDDDLMEALFGYVVNHNTPKANDSGSPSKGSSASAPSTKASTLLDPRKSQNTAIVLKSLAISRKEVFDALLDGHGLNTDTIEKLSRVAPTEEEQSLILQYRGDPENLPAAESFLYHTLKAVPSAFKRLNAMLFRLNYDAEIVEIKEFLQTLELGCKELRNQGVFLKLLEAVLKAGNRMNAGTHRGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRDYSVSRSSSRSRSSSSISSGNTENSVSDEQRKREYIILGLPIVGGVSSEFSNVKKATLTDYKSFVGSISALSARIAEIRELVLKCGGNDKGGNFAREMNRFLSEAEEEVKLVSEEHGRVMQLVKKTTAYYQGGGAWKESEQPLQLFEIVKDFLGMVDQACIEIARNMQKRKCTK 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02056 819 MobiDBLite consensus disorder prediction 171 198 - -
Arst5g02056 819 SMART it6_source 378 816 IPR015425 -
Arst5g02056 819 MobiDBLite consensus disorder prediction 432 461 - -
Arst5g02056 819 MobiDBLite consensus disorder prediction 47 67 - -
Arst5g02056 819 SUPERFAMILY Formin homology 2 domain (FH2 domain) 455 816 - -
Arst5g02056 819 MobiDBLite consensus disorder prediction 171 191 - -
Arst5g02056 819 Coils Coil 740 760 - -
Arst5g02056 819 MobiDBLite consensus disorder prediction 368 389 - -
Arst5g02056 819 MobiDBLite consensus disorder prediction 651 670 - -
Arst5g02056 819 Gene3D Formin, FH2 domain 400 819 IPR042201 -
Arst5g02056 819 MobiDBLite consensus disorder prediction 250 275 - -
Arst5g02056 819 Pfam Formin Homology 2 Domain 380 801 IPR015425 -
Arst5g02056 819 MobiDBLite consensus disorder prediction 279 364 - -
Arst5g02056 819 MobiDBLite consensus disorder prediction 229 389 - -
Arst5g02056 819 MobiDBLite consensus disorder prediction 651 671 - -
Arst5g02056 819 ProSiteProfiles Formin homology-2 (FH2) domain profile. 378 819 IPR015425 -
Arst5g02056 819 PANTHER FORMIN-RELATED 313 812 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02056 Arst-Chr5 29718580 29721588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02056 11 816 FH2 protein (formin) Gene Family AT1G70140 43.250 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02056 - - gmx:100780368 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g02056 5 29718580 29721588 Arst5g02056 5 29718580 29721588 ECH