Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02053 ATGACTCAAGTGATGGAGAGAGACGGCGTCGTTTCAGAAGAAGTTCATGTCTTAGCCGTCGATGATAGCCTCGTCGATCGGAAGGTCATTGAGCGCTTACTCAAAATCTCAGCTTGTAAAGTTACTGCTGTTGATAGTGGAATCAGTGCCCTGCAGTTACTGGGGCTAGACGAACAGAGAACATCTGAATCAGATGATTTTGTGGGTTTAAAGGTAGATCTAATTATCACAGACTATTGCATGCCTGGAATGTCTGGTTATGATTTGCTCAAAAAAATCAAGGGATCGTCCACTTTCAGAGAAATTCCGGTCGTCATCATGTCCTCGGAAAATATCTTGCCACGAATTGACAGATGCTTAGAGGAGGGAGCAAAGGATTTCATAGTGAAGCCAGTGAAGTTATCTGACGTGAAACGGTTGAAGAATTATATGAGCACCGCCACCAGGGACGTTAGCGCCGCCGAAGCCGGAGGTTGCAGCGGTGGCGGCGGTGGTGGTGGAGGAGGAATTAACAAAAGGAAGCTTTCAGACACTACCGCCTTTGATTATCTGTCATCATCTCCACCGTCCATTTCGTCCTCAATAACCCCCTTATCATCGCCGTCCGATTCTTCTTCATCGCCTTCGCCGTCGCCATTATCTTCGCCCATCAGATCGCTTGATTCTCCAATCCGACGGCTTAAAATGACCGGCGCAGATTGA 702 0.4758 MTQVMERDGVVSEEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGISALQLLGLDEQRTSESDDFVGLKVDLIITDYCMPGMSGYDLLKKIKGSSTFREIPVVIMSSENILPRIDRCLEEGAKDFIVKPVKLSDVKRLKNYMSTATRDVSAAEAGGCSGGGGGGGGGINKRKLSDTTAFDYLSSSPPSISSSITPLSSPSDSSSSPSPSPLSSPIRSLDSPIRRLKMTGAD 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02053 233 MobiDBLite consensus disorder prediction 185 218 - -
Arst5g02053 233 Gene3D - 15 160 - -
Arst5g02053 233 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 156 IPR045279 GO:0009736
Arst5g02053 233 CDD REC_typeA_ARR 17 140 - -
Arst5g02053 233 ProSiteProfiles Response regulatory domain profile. 16 145 IPR001789 GO:0000160
Arst5g02053 233 Pfam Response regulator receiver domain 17 137 IPR001789 GO:0000160
Arst5g02053 233 MobiDBLite consensus disorder prediction 185 233 - -
Arst5g02053 233 SMART REC_2 15 144 IPR001789 GO:0000160
Arst5g02053 233 SUPERFAMILY CheY-like 15 139 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02053 Arst-Chr5 29559435 29561161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g02053 13 229 Response Regulator Gene Family AT1G10470 53.527 3.25e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst5g02053 Response_reg 5.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02053 K14492 - gmx:100787696 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g02053 5 29559435 29561161 Arst5g02053 5 29559435 29561161 ECH