Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g02050 ATGGAGGCTTCGAGGCGGTCTTCATCCCTCATCGTTTGTGTTGTTTGTGCTGAGTCAGTTTTGATTCGGGTAATAATGGCATCAAGTAGCAAGTTTTGGAAGGATGCGTTTATGTGGAATGAGCCTCTTCTGGACAACTGGACGGAGGGCAATGCTGGTGTGTCGAATCCACAGAATGCATTGCACATAATGGCAGCTGGTAGCATAATGTTTGTCTTGTTATTTGAGGACACAATGTATGATACCAGAGTGGAGGAAGATGCTGAGTCATCCGATTGGGAAGGTATGGGGGCTTCGATGTTGCCCGTTTTTTTGGGTTTGGATGGGTTGCGAGCGGAAGATGTTCTTGAAATGGAGTTCTCTTCACCTCAGGAGGCAAGCGGCTTCTATAACAATTACAGCCGACTAAAGGGCTTTGCATCAAGGCGAGGCAAGACGGTTAGAAACACTGCCGGAGAGATAGTGCGGTACACGTTTGTTTGTAATAGGCAAGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGCTGTAACCCGATGTGGATGTTTGGCGGAGATGAGGATAAAGAGGAAAGAGGGTAGTGGGAGGTGGTATGTTTCGCGTTTTGTCGAGGAGCATAACCACGAACTTGCGTATGGGAAGCTTGTTGATTATCTGCGGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAACCATGAGAGAGCTTGGGATTAGCATACCTAAGATTTATGAGTCCTTCGCAGCACAACTAGGGGGTTTTAACCTAGTAACATTCACAAAGCAAGATATGTATAACGAGATACGGAAACAGAGAGGTCTGCAAGGCGGAGACGTAAGTGCAGCTGTTAGGTACTTGGAAGGTCTGGCACGCATGGATGGGAAAATGTTTTGGCGCTACAAGTTGGGATCAGGGCAACACCTATGCAACTTGTTTTGGAGCGATGGTCGTTGTCAGGAAGATTATGCGATATTCGGCGATGTGCTAGCATTCGACGCTACCTATGGCCGCAACAAGTACAACCTACCTGTTGTAGTATTTTCCGGAGTAAACCACCACAACCAGACATGCGTATTCGGAACAGCAATGGTGTCATGCGAATCGCAGGAGTCATATATTTGGGTTCTTAGGCAGTTTCTGGAATGCATGCAAGGTAAGGCACCGCAATCAGTCATCACGGATGGCGACCCGGCCATGCGTATAGCAATCCGCACTGTTTTTCCTGACGCACATCATCGGTTGTGTGCCTGGCATCTGCTGAGGAACTCGACTGCTAACATAAGCGACCCGAGATTCACACAGATGTTTAGACACTGCATGCTGGCAGATATGGAAATCGAAGAGTTCGAAGCGTATTGGGAGTCAATGGTCAATGAGTGCGGTGTGAGGGAGGTTGAGTGGGTTAAGGACTTGTACACCAAAAAGCACGCTTGGGCAACCGCATACATTCGTGGTAGATTTTTTGCTGGAGTACGGACAACCTCTAGGTGCGAGTCACTACACGCCAAACTAGGGAGGTTTGTTGAGAGCAGGTACGGGGTGTTAGAATTTGTCAGAAATTTTCAAAGGTGTGTGGATTTTCTGCGTGACACCGAGGATGAGCTAGACTTTCGTTCATGGTACGGAACACCTGTGCTACAAACGGAGTTCGTTGAGCTGGAAAAGTCTGGATGGACTATGTTCACCCGCGAAATGTTTCTCAGATACCGGGATAGCCTGAAACGGTGTGTTCGTGTTAGAATATGTGAATTTGATGACAGTGACAACCCTCATGCATATACTCTTCAGAAGTATCAGAGGCCTGAGATGAATTGGAAGGTTTATAGGGACCATATCTCGAACAGATTTAGTTGCAGCTGCATGCGTATGGAGTCGTTTGGCATTCCTTGTGTGCATATCCTTTCCGTTTGTGTAAGGCTAGACTTGGTGGAAATCCCTGAAAGCCTGGTGCTGCGTAGGTGGTCTAAGGCAGCCAAATTGGAGATCCATAACCATTGTGTTGAGCAACACACTGCTGACCCAAGTGTGACCTATAGGACACGATTGGGTGCTTTCTCCCAGCTGTGTAAGCGTTTAGGGCGCGTTGCTTGCATGAGCGATGAAGACTTCAAGCTTTACTCAAACAAGCTTATGAGCGATGCTCTGTTCCTTGAAATAAAGTACGGCTTAAGACCATTAACGGATAATATGACAACAGCAAATGATTGCGGGGTGAAGGACCCCATTCGTGTCAGGACAAAAGGCACGGGTCGGATGAGTCAAGCAGGCGGTTCTGTGCCGAAAACGAAAAGAAAGTGCAGCACATGCGGGAAGCTCGGGCACCGGAGGACTAGATGCCCCAACGGAGGCGCACAACCTTCACCCAGGAACAAACAATCACTTGCTGGGAGAAATAAACGCAAGCGAACGAAGGTACCCGTCGTTGTTCCAGATAATTGTCCCCCTGAAAATGCATCTCAAGCTGGATGCGACTTATGGGAGCAATTTTCGCTTGCAGACCCATGA 2535 0.4785 MEASRRSSSLIVCVVCAESVLIRVIMASSSKFWKDAFMWNEPLLDNWTEGNAGVSNPQNALHIMAAGSIMFVLLFEDTMYDTRVEEDAESSDWEGMGASMLPVFLGLDGLRAEDVLEMEFSSPQEASGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQGFREKKWLEKVDRKREHKAVTRCGCLAEMRIKRKEGSGRWYVSRFVEEHNHELAYGKLVDYLRSHRKISEVEVAQLTTMRELGISIPKIYESFAAQLGGFNLVTFTKQDMYNEIRKQRGLQGGDVSAAVRYLEGLARMDGKMFWRYKLGSGQHLCNLFWSDGRCQEDYAIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGTAMVSCESQESYIWVLRQFLECMQGKAPQSVITDGDPAMRIAIRTVFPDAHHRLCAWHLLRNSTANISDPRFTQMFRHCMLADMEIEEFEAYWESMVNECGVREVEWVKDLYTKKHAWATAYIRGRFFAGVRTTSRCESLHAKLGRFVESRYGVLEFVRNFQRCVDFLRDTEDELDFRSWYGTPVLQTEFVELEKSGWTMFTREMFLRYRDSLKRCVRVRICEFDDSDNPHAYTLQKYQRPEMNWKVYRDHISNRFSCSCMRMESFGIPCVHILSVCVRLDLVEIPESLVLRRWSKAAKLEIHNHCVEQHTADPSVTYRTRLGAFSQLCKRLGRVACMSDEDFKLYSNKLMSDALFLEIKYGLRPLTDNMTTANDCGVKDPIRVRTKGTGRMSQAGGSVPKTKRKCSTCGKLGHRRTRCPNGGAQPSPRNKQSLAGRNKRKRTKVPVVVPDNCPPENASQAGCDLWEQFSLADP 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g02050 844 MobiDBLite consensus disorder prediction 758 830 - -
Arst5g02050 844 Pfam SWIM zinc finger 627 648 IPR007527 GO:0008270
Arst5g02050 844 SMART 26again6 626 653 IPR006564 GO:0008270
Arst5g02050 844 Pfam MULE transposase domain 338 432 IPR018289 -
Arst5g02050 844 ProSiteProfiles Zinc finger CCHC-type profile. 774 791 IPR001878 GO:0003676|GO:0008270
Arst5g02050 844 SUPERFAMILY Retrovirus zinc finger-like domains 755 793 IPR036875 GO:0003676|GO:0008270
Arst5g02050 844 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 115 717 IPR031052 GO:0006355
Arst5g02050 844 Pfam FAR1 DNA-binding domain 129 218 IPR004330 -
Arst5g02050 844 ProSiteProfiles Zinc finger SWIM-type profile. 618 651 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g02050 Arst-Chr5 29360484 29364745 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst5g02050 MULE 9.4e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g02050 - - aip:107611673 1518.83