Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01986 ATGTCGATCTCCTGCTCCGACTTCTTCTCTGACTCCGATCTTTTCTGCGCTGAGGACACCTCCGGAATCCTCTCCGAAGAGTCTCCGGAATCCTCTTCCTCCTTCTCCGACTTCGACTCATTATCTCCGCCGCTGCCGCCGATGGAGGAGGAGGAGTCCATAGCCGGATTCCTCGAAGACGAACAAAACTTCGTCCCTGGATTCGAGTATCTCACGAGGTTCCAATCTCACTCGCTGGATGCCTCCGCAAGAGAAGAATCCGTTGCCTGGATTCTCAAGGTGCAGGCTTACTACGGTTTTCAGCCGTTGACCGCGTATCTTTCCGTCAACTACATGGATCGATTCTTGAACTCTCGGCAGTTGCCGCAAACAAATGGGTGGCCGCTGCAACTTCTATCTATTGCATGCTTGTCTCTAGCGGCAAAGATGGAAGAGCCTCTTGTCCCTTCTCTCTTGGACCTTCAGGTAGAAGGTGCCAAATACATTTTTGAGCCCAGAACAATTCAAAGGATGGAGCTGCTTGTTCTGGGTGTCCTGGATTGGAGGCTAAGATCAGTCACCCCATTTAGCTTTCTCGGTTTCTTTGCTTGCAAGTTGGATTCAACTGGAACTTTTACTAGATTCCTCATTTCACGGGCTACACAAATCATATTATCCAATATCCAAGAGGCTAGCTTTCTTGCATACTGGCCATCATGCATTGCTGCTACGGCCATACTATGTGCAGCTAACGAAATTCCAAATTGGTCCCTCGTCAAGCCTGAGCATGCCGAATCCTGGTGCCAGGGGCTTAGAAAAGAGAAAATTAGAGGTTGCTACCAATTAATGCAAGAGCTACTTGTGATTGATAATAATCAGAGGAAGACTCCTAAGGTGTTACCACAGCTGCGAGTGATGACGACTCGGCCCCTAACGAGGTCAAGTGTCTCCTCATTCTTATCATCGTCGTCGTTGTCATCGTCTACTTCATCCTCTGCATTCTCATTGTCTTATAAAAGGAGGAAATTAAATAACTGTTTCTGGGTAGATGATCACAAAGGAAACGCCCCTTGA 1053 0.4796 MSISCSDFFSDSDLFCAEDTSGILSEESPESSSSFSDFDSLSPPLPPMEEEESIAGFLEDEQNFVPGFEYLTRFQSHSLDASAREESVAWILKVQAYYGFQPLTAYLSVNYMDRFLNSRQLPQTNGWPLQLLSIACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIQRMELLVLGVLDWRLRSVTPFSFLGFFACKLDSTGTFTRFLISRATQIILSNIQEASFLAYWPSCIAATAILCAANEIPNWSLVKPEHAESWCQGLRKEKIRGCYQLMQELLVIDNNQRKTPKVLPQLRVMTTRPLTRSSVSSFLSSSSLSSSTSSSAFSLSYKRRKLNNCFWVDDHKGNAP 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01986 350 Gene3D - 57 274 - -
Arst5g01986 350 MobiDBLite consensus disorder prediction 22 49 - -
Arst5g01986 350 SMART Cyclin_C_2 186 321 IPR004367 -
Arst5g01986 350 FunFam D2/4-type cyclin 67 184 - -
Arst5g01986 350 SMART cyclin_7 89 177 IPR013763 -
Arst5g01986 350 ProSitePatterns Cyclins signature. 84 115 IPR006671 -
Arst5g01986 350 SUPERFAMILY Cyclin-like 168 282 IPR036915 -
Arst5g01986 350 CDD CYCLIN_AtCycD-like_rpt1 83 181 - -
Arst5g01986 350 PANTHER CYCLINS 51 281 IPR039361 -
Arst5g01986 350 SUPERFAMILY Cyclin-like 46 183 IPR036915 -
Arst5g01986 350 MobiDBLite consensus disorder prediction 24 40 - -
Arst5g01986 350 CDD CYCLIN_AtCycD-like_rpt2 186 276 - -
Arst5g01986 350 Gene3D - 67 184 - -
Arst5g01986 350 Pfam Cyclin, C-terminal domain 186 292 IPR004367 -
Arst5g01986 350 Pfam Cyclin, N-terminal domain 57 183 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01986 Arst-Chr5 26957882 26962489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01986 1 344 Core Cell Cycle Gene Families AT1G70210 60.632 1.97e-131 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01986 K18810 - gmx:100775224 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01986 5 26957882 26962489 Arst5g01986 5 26957882 26962489 ECH