Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01960 ATGTCGAATTTGGATCTCTCAAAAATTTCTCTGCGGCCATTCAAGCTAAGCGATGTTGACGACTTTTTGCTATGGGCTGGGGATGATCAAGTCACACAAAACTTAAGATGGAAGACTTGTGGTTCAAGGGAAGAGGCTTTGGCCTTCATAAGAGACGTGTGCATACCTCATCCGTGGCGACGCTCAATCTGCCTTGACGACCGTTCCATAGGCTTTGTTTCGGTGTATCCGTGGTCAGGTGATGATAGATGCAAGGCTGACATAGGCTATGCCGTGGCGGCAGATTACTGGGGCCAAGGCATAGCCACCAAAGCAGTGAAGATGGCTGTACCTCAAGTGTTCAATGACTTGTCTCATTTGGTAAGGTTGCAGGCTTTCACTTCCCCTGAGAACAAGGCTTCTCAGAGAGTAGTGGAAAAGGCTGGGTTCCTTAAGGAGGGTCTGCTCAGAAAGTACATTTATTTTGAAGAGAACATTAAGGATTCGGTAGTGTTTAGTTTCTTGTCAACTGATGAATTTCCTCATGATGACTAG 534 0.4625 MSNLDLSKISLRPFKLSDVDDFLLWAGDDQVTQNLRWKTCGSREEALAFIRDVCIPHPWRRSICLDDRSIGFVSVYPWSGDDRCKADIGYAVAADYWGQGIATKAVKMAVPQVFNDLSHLVRLQAFTSPENKASQRVVEKAGFLKEGLLRKYIYFEENIKDSVVFSFLSTDEFPHDD 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01960 177 CDD NAT_SF 63 110 - -
Arst5g01960 177 Gene3D - 2 175 - -
Arst5g01960 177 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 160 IPR000182 GO:0016747
Arst5g01960 177 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 168 IPR016181 -
Arst5g01960 177 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 171 - -
Arst5g01960 177 Pfam Acetyltransferase (GNAT) domain 9 143 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01960 Arst-Chr5 26090693 26091289 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Arst5g01960 Acetyltransf_3 4.7e-24 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01960 - - gmx:100527210 296.204