Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01947 ATGCCATTTGGTCTGGTTTCAGCCTGGAACAAGCGCCGTCGAAGCAAGTCCGAAGATCATACTGACCCTTGTATTTTTCTCTTCCTTTTTTCTTCTTCTCATGCTTTAATGGCTTGGGTTTATAGACCTGCGGAGTGCTGGCAACTCGAAGAACAAGTGACACGGCCTGCGAAAAGACTGCATGGATCAGCTGTGTTCACTCTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATGACAATCTGCTAGGGAAAGGAGGATTCGGCAAAGTGTACCGCGGCATTTTACGGTCGGGAGAGGTCGTCGCAATCAAGAAGATGGCGCTGCCAGCAATTAAAGAAGCCGAGGGGGAACGTGAGTTCCGAGTTGAAGTGGACATCTTGAGCAGACTCGACCACCCAAATCTTGTTTCTTTGATAGGCTACTGTGCTGATGGAAAACATAGATTCCTAGTATATGAATACATGCATAATGGAAACCTGCAAGATCATTTGAATGGAATTGGAGAACGAAAAATGGATTGGCCCCTAAGACTCAAAGTGGCACTAGGAGCTGCAAAAGGCCTTGCTTATCTCCACTCAAGTTCTGATGTTGGAATTCCCATTGTTCACAGAGATTTCAAATCAACCAATATTCTCTTAGATGCTAACTTTGATGCAAAGATATCTGACTTTGGGCTTGCCAAGTTAATGCCAGAAGGTCAAGAGACACATGTCACGGCCAGAGTTCTTGGCACCTTTGGCTATTTTGATCCTGAGTATACATCGACTGGGAAACTTACTCTGCAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTCTGGAACTTTTGACTGGACGCCGAGCAGTTGATCTAAACCAAGGTCCCAATGATCAGAACCTTGTACTACAGGTGAGGCATATTCTGAATGATCGAAAGAAGCTGCGTAAGGTCATAGATCCAGAGATGGCCCGAAATTCTTACACTATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGCGTCCGAACTGATAGTAATGAGAGACCTTCAATGGCGGAATGTGTACAGGAACTCCTAATGATTATCTATACAAATTCAAAAGGTTTGGGAATGGTTATGCATAGTTTGAGATTGATCTAG 1131 0.4394 MPFGLVSAWNKRRRSKSEDHTDPCIFLFLFSSSHALMAWVYRPAECWQLEEQVTRPAKRLHGSAVFTLKEMEEATCSFSDDNLLGKGGFGKVYRGILRSGEVVAIKKMALPAIKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIGERKMDWPLRLKVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNILLDANFDAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLRKVIDPEMARNSYTIQSIVMFANLASRCVRTDSNERPSMAECVQELLMIIYTNSKGLGMVMHSLRLI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01947 376 PANTHER OS01G0750732 PROTEIN 30 358 - -
Arst5g01947 376 ProSiteProfiles Protein kinase domain profile. 78 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01947 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Arst5g01947 376 Gene3D Transferase(Phosphotransferase) domain 1 157 366 - -
Arst5g01947 376 Gene3D Phosphorylase Kinase; domain 1 45 156 - -
Arst5g01947 376 FunFam receptor-like serine/threonine-protein kinase NCRK 157 367 - -
Arst5g01947 376 Pfam Protein kinase domain 79 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01947 376 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Arst5g01947 376 SUPERFAMILY Protein kinase-like (PK-like) 65 362 IPR011009 -
Arst5g01947 376 CDD STKc_IRAK 84 355 - -
Arst5g01947 376 FunFam serine/threonine-protein kinase PBS1-like 46 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01947 Arst-Chr5 25667552 25670682 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01947 61 359 Receptor kinase-like Gene Family AT3G58690 47.697 4.34e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Arst5g01947 Pkinase 3.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01947 - - aprc:113868910 675.241