Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01940 ATGGGGAATAAGATAATAGCGCCATTTGTGGGAATGGTAATGGCTATGGTGTTGCAAAGTGGTAGCATGGTTGTTATCAAAGCAGCCATGAATGATGACTTCAACAAATATGTCTTGATTGTCTATTCTTTGGCACTCTCCACCCTACTTCTTCTCCCCTTTCTCTTCCTTCTACCCAGGTCAGAGCGTCCTACTCTGAGTTTCTCAACACTTTGCAACCTATTTTTGCTTTCTCTGTGTGGAAGTTCAGGACAAATATTTGCATATGTGGGCATAGATCTCAGCTCACCAACTCTTGCCTCTGCCATGCTCAACCTCATTCCAGCTTTAACTTTTGTACTTGCACTTTTATTCAGGATGGAAAAAGTTGAATGGGGACATTTCAGCATCCAAGCTAAAGTCTTGGGAACAGTGGTATCAATTGGTGGAGCATTTGTTGTGATATTATATAAGGGCCCACCAATCTTCAAGGCACCCATCTCCTCACTCTCTTCAATCCCATTATCATTTTCACCTCATTTTAACTGGATCTTGGGAGGCTTTTTCTGTGTTGCTGATTCTTTCGTAGCTTCAATCTGGTATATATATCAGGCGTCAGTAATAAGGAATTACCCTGCTGTAATGGTGACAGTGTTCTTCCAACTCTTATTTTCAACCATTCAGTGCTCAATATTTGCATTAATTGCAGTTAGAGATCAAAGTGCATGGCAGCTGAAGCTAGACACAGGGTTGATTGCAATCTTTTACCAGGCAATAGCTGCAACAACATTACGGTACCTGTTATGCACTTGGAGCGTCCAAAAAGCTGGACCATTTTTTTGCTCTATGTTCAAACCTATTTTAATCATCTTCACTGTTATCATGGGTGCTCTGTTCCTTGGAGATGACTTTTACCTTGGAAGCTTGATTGGTGCAGTTATAATCGTGGTAGGTTTTTATGGTGTAATGTGGGGAAAGGCCAAAGAAGAGAAATGCATGATAATTGATGAAGAGAGGTTGCAATCAACGTGCCAAAATGCTCCTCTCTTACATGACAAACACCTTACAGTATAA 1053 0.4093 MGNKIIAPFVGMVMAMVLQSGSMVVIKAAMNDDFNKYVLIVYSLALSTLLLLPFLFLLPRSERPTLSFSTLCNLFLLSLCGSSGQIFAYVGIDLSSPTLASAMLNLIPALTFVLALLFRMEKVEWGHFSIQAKVLGTVVSIGGAFVVILYKGPPIFKAPISSLSSIPLSFSPHFNWILGGFFCVADSFVASIWYIYQASVIRNYPAVMVTVFFQLLFSTIQCSIFALIAVRDQSAWQLKLDTGLIAIFYQAIAATTLRYLLCTWSVQKAGPFFCSMFKPILIIFTVIMGALFLGDDFYLGSLIGAVIIVVGFYGVMWGKAKEEKCMIIDEERLQSTCQNAPLLHDKHLTV 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01940 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 151 - -
Arst5g01940 350 Pfam EamA-like transporter family 12 148 IPR000620 GO:0016020
Arst5g01940 350 Pfam EamA-like transporter family 179 316 IPR000620 GO:0016020
Arst5g01940 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 321 - -
Arst5g01940 350 PANTHER WAT1-RELATED PROTEIN 8 329 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01940 Arst-Chr5 25619992 25627373 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01940 3 343 Nodulin-like Gene Family AT5G40240 38.682 5.54e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01940 - - gmx:100816194 454.136