Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01920 ATGTCTTCTCTGATAGATGAGTTGAAGGAGCAGCTTTTGGAGGTGGAGAATGGCGAAGGACACCCGAAAATGGAGGTACGCGATCTTCTGAGAGTGTCGGATGCAGGGGTCCCAATACTGAAGGGCATCAGTCTGGAAATCCCAAAGGGCGTCATAGTGGGAGTCATAGGCCCCAGTGGCAGCGGAAAGTCAACGCTCCTCAGGGCAGTCAACCGCCTCTGGGAGCCTCCCTCCGCCTCCGTCTTCCTCGACTCCCGGGACATCTGCCAGCTCGACGTGCTCTCCCTCCGCCGCAAAGTCGGCATGCTGTTCCAGCTGCCCGCCCTCTTCGAAGGCACTGTAGCCGACAACGTGAGGTACGGCCCCAACCTCAGCGGGAAGAAGCTTTCAGATGTTGAGGTATGTAAGCTGTTGATGCTGGCGGACCTGGACGCTTCCTTCCTTCAGAAGTCGGCGGCGGAGTTGTCAGTGGGTCAAGCACAGAGGGTTGCGCTGGCCAGAACTCTTGCTAATTCCCCTGAGGTTTTGCTGCTTGATGAGCCAACGAGTGCTTTAGATCCTATTTCCACGGAGAATATAGAGGCTGCACTGTTGAAGCTCAACAAGAATAATGGCATGACCATGATTATGGTGTCTCACAGCATCAAACAAATCCAGAGAATTGCTGACGTCGTCTGCCTCCTCGTTGATGGTGAGATTGTTGAGATTCTCAACCCTAACCAACTCTCCCAAGCCAACCATCCCATGGCTCAGAGGTTTCTTCAACTCACCACTTAA 777 0.5393 MSSLIDELKEQLLEVENGEGHPKMEVRDLLRVSDAGVPILKGISLEIPKGVIVGVIGPSGSGKSTLLRAVNRLWEPPSASVFLDSRDICQLDVLSLRRKVGMLFQLPALFEGTVADNVRYGPNLSGKKLSDVEVCKLLMLADLDASFLQKSAAELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEAALLKLNKNNGMTMIMVSHSIKQIQRIADVVCLLVDGEIVEILNPNQLSQANHPMAQRFLQLTT 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01920 258 ProSitePatterns ABC transporters family signature. 155 169 IPR017871 GO:0005524|GO:0016887
Arst5g01920 258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 24 255 IPR003439 GO:0005524
Arst5g01920 258 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 6 257 IPR005670 GO:0005315|GO:0016020|GO:0035435
Arst5g01920 258 Pfam ABC transporter 40 183 IPR003439 GO:0005524
Arst5g01920 258 SMART AAA_5 49 232 IPR003593 GO:0016887
Arst5g01920 258 CDD ABC_PstB_phosphate_transporter 24 242 IPR005670 GO:0005315|GO:0016020|GO:0035435
Arst5g01920 258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 245 IPR027417 -
Arst5g01920 258 Gene3D - 25 257 IPR027417 -
Arst5g01920 258 FunFam ABC transporter, ATP-binding protein 21 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01920 Arst-Chr5 25248248 25249395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01920 37 256 Calmodulin-binding Proteins AT2G36910 31.466 2.86e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01920 K02068 - gmx:100791365 388.652