Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01919 ATGCCATTACCATATTCTAAAATGTATAGGCTTCACTCTCAAATCCACCAGAGCAATGGTGCTCCTATTCTTTCTCCATATTCTCCTTCTTCTTCTTCTTTTTCTTCTTATAGTTCTTCTAATTCAGCTTCTTCATCCTCAGATTCTTCATCTGGGAATAGTAGAATAAGCCCTGCAATTATTTTCATCATAGTAATTTTATCTGTTGTGTTCTTCATCTTGGGCACCCTCCACCTGCTTGTTAGATTTCTCATGAGACAAAGATCTTCTTCTTCCTCATCAATTTCTCAATCCAATAGGTATCCTGAAATGTCTGAATCTGATGCATACCAGAGACAGTTGCAGCAACTATTCCACCTCCATGACTCAGGTTTAGATCAGGCTTTCATTGATGCACTCCCTGTGTTTCTCTACAAGGAGATAATTGGCTTGAAGGAGCCATTTGATTGTGCTGTTTGCCTTTGTGAGTTCTTGGAACAAGACAAGTTGAGGTTGCTGCCAAATTGCAACCATGCTTTTCACATTGACTGCATTGATACTTGGTTGCTTTCAAATTCAACTTGTCCCCTTTGTAGAGGGACACTTTATGCACCAGGGTTTTCATTTGAGACCCCAGTTTTTGACTTTGAAGGTCCATGTTATGAGGACGAAGATGGTGTTTCAGTTTCAGGATTTGGTGTCAGTGGTGCTGGTTCTTCTAACAAGCCTGCTGAGAATCACATAAGGAATGGGAAGAGGGTTTTTTCTGTGAGGCTTGGAAAATTCAGAAGCTCAAATAATAATGGAGTAGATGGTGTTGAAAAATGTGAAGGAGAGAGTAGTAATAGTAGTATTAGTTTTAGTAATAGTCATGGTAATTTGGATGCAAGGAGATGCTACTCAATGGGGTCTTACCAATATGTTGTTGCTGATTCTGATTTGAGGGTGGCTTTTGTGTCCAAGCACAGTGGCAGTATGAGACAATTGATTAAGGGAAGAATAGCTACAACAAATGGGAACAATTTTTCTTCAACTGATGTTGATGTTGTTGAGGGAAAAAAGATCAGCAATGCAAGAAAAGGTGAGAGCTTTTCTGTTTCCAAGATATGGCAATGGTCTAGGAAGGATAACAGTAAGTTAAGAAGTTCATCAGAGGCTCGAATTCCATAA 1149 0.3934 MPLPYSKMYRLHSQIHQSNGAPILSPYSPSSSSFSSYSSSNSASSSSDSSSGNSRISPAIIFIIVILSVVFFILGTLHLLVRFLMRQRSSSSSSISQSNRYPEMSESDAYQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIIGLKEPFDCAVCLCEFLEQDKLRLLPNCNHAFHIDCIDTWLLSNSTCPLCRGTLYAPGFSFETPVFDFEGPCYEDEDGVSVSGFGVSGAGSSNKPAENHIRNGKRVFSVRLGKFRSSNNNGVDGVEKCEGESSNSSISFSNSHGNLDARRCYSMGSYQYVVADSDLRVAFVSKHXSGSMRQLIKGRIATTNGNNFSSTDVDVVEGKKISNARKGESFSVSKIWQWSRKDNSKLRSSSEARIP 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01919 383 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 197 IPR013083 -
Arst5g01919 383 FunFam RING-H2 finger protein ATL46 112 197 - -
Arst5g01919 383 SMART ring_2 150 191 IPR001841 -
Arst5g01919 383 CDD RING-H2_EL5-like 149 192 - -
Arst5g01919 383 Pfam Ring finger domain 149 192 IPR001841 -
Arst5g01919 383 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 50 364 - -
Arst5g01919 383 ProSiteProfiles Zinc finger RING-type profile. 150 192 IPR001841 -
Arst5g01919 383 SUPERFAMILY RING/U-box 129 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01919 Arst-Chr5 25245284 25247185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01919 45 373 C3H Transcription Factor Family AT2G18650 41.761 1.37e-59 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01919 - - gmx:100805154 438.343