Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01865 ATGGTGAAGCGAAACAAACCACCTAAATCCACGGCCTCCGCGTTCTCCGCCGCCGCCGAAATCTCCACCACGGCCATCAAAGTCTCCACCACCACCACCCTCTCCGCGTCCACCAAAACACTCGCCTCCTCAAAAACCCCCCCGCCGCCGCCATCGCCAGTTCCGCCACCTCCGCCACCACGGGTTACACCTCCTCCACCCCCAACTTCAATAACGCCACCAGATTCACACTTTACTACTCCACCACCTCAAGTTACTCCTTCTCATCCTCCTCCTCCTCCTCCTCCTCCGCCACCGCTGCCGCCGACAACTAGTTCCCCTCCAAACCACCCTACTACGCCGCCACAATCACCTTCTCCGCCTTCAAGATCAGGCGGTGATTCATCTTCTTCGAAGCGCCATTCTCCCCCAGCGTCGTCAACTTCGAATACACGAGGTTATAGTGATCGGATAGGCCAACATGTTGGTTTTGCAGTGGCTGCAATTTCCATCATTGCACTCATTGCTGTAATTCTCTTCTTTTTTTTAGGAAGAAGAAAGATCGAGGCGATGCCGGTTGGCCACAAGGCCTGTCGTGGAAATGTACACTACTACTACAAACCAGGCGGGGCCAATGGTCCACAAGTAGGGAAGTACGGTTCACAAAAAAAACAGTCTACTCCGGTGAGAGGCAACTATGGAGGTTACGTGAGATCACCTTCAGAGCTACAACAAATGAGTGGGGGTATAATGGCTTATAGCTACGAAGAAATCGTGGAAGTAACGAACGGGTTTTCGAGTGAGAACGTAATAGGAGAAGGTGGGTTCGGGAGTGTGTACAAGGCTTTAATGCCCGATGGTAGAGTAGGAGCAGTGAAGATGCTGAAACCTGGTAGTGGCCAAGGAGAAAGAGAGTTTAGGGCTGAGGTTGACATTATTAGTAGGATTCATCATCGTCATTTGGTTTCTTTGATTGGTTATTGCATAGCTGAGCAACATAGAGTTCTTGTCTATGAGTTTGTTCCTAATGGGAATCTCAGTCAGCACTTGCATGGAAATAACTTACCTGTTTTGGATTGGCCGAATAGGATGAAGATAGCAAATGGCGCTGCAAGGGGCATAGCGTATCTGCATGAGGGCTGCAACCCAAGGATTATTCATAGGGATATTAAGTCCGCAAACATACTTTTGGATGGTGCTTATGAAGCACAGGTTGCAGACTTTGGACTTGCCAAACTAACTGATGACGCTAACACCCATGTATCAACCAGGGTGATGGGGACCTTCGGATACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTCTCATTTGGAGTTGTCCTGCTTGAGCTCATAACTGGAAGGAAGCCCGTTGATCCAAAGCGGCCCATCGGAGAAGAGAGTTTGGTTGAGTGGGCTCGTCCACATCTTCTTCTTGCAATGGGGACGCGTGCGTTTGGTGATCTAGAAGACCCAAGGCTTGAAGGACGCTATGTTCATTCTGAAATGTTAACCATGATTGAGGCTGCTGCCGCATGTGTTCGCCACTCCGCTCCTAAACGCCCCCGTATGGTTCAGGTGGCAAGAGCCTTAGAGTGTGGAGAACAACTAGATCTATCAAATGGGGTGAAATATGGTCAAAGCAGAATATATGATTCAAGCCAGTACATTAATGATATTATGAGATTTAGAAGGATGATGGCTGATGGCAATTTTAGCGGTTACGACTATGATATGTATAGTACAGAACACAGTTCAAGAGAGTTGTCTCCTTCTTTAGGGATGCCAACTAGTTCAGGTGGTAATTCAGAACCTAGATCTTTCAACAACCATAGGAGCTTCTCTGACTCTGAGAAACCATAA 1863 0.482 MVKRNKPPKSTASAFSAAAEISTTAIKVSTTTTLSASTKTLASSKTPPPPPSPVPPPPPPRVTPPPPPTSITPPDSHFTTPPPQVTPSHPPPPPPPPPPLPPTTSSPPNHPTTPPQSPSPPSRSGGDSSSSKRHSPPASSTSNTRGYSDRIGQHVGFAVAAISIIALIAVILFFFLGRRKIEAMPVGHKACRGNVHYYYKPGGANGPQVGKYGSQKKQSTPVRGNYGGYVRSPSELQQMSGGIMAYSYEEIVEVTNGFSSENVIGEGGFGSVYKALMPDGRVGAVKMLKPGSGQGEREFRAEVDIISRIHHRHLVSLIGYCIAEQHRVLVYEFVPNGNLSQHLHGNNLPVLDWPNRMKIANGAARGIAYLHEGCNPRIIHRDIKSANILLDGAYEAQVADFGLAKLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPKRPIGEESLVEWARPHLLLAMGTRAFGDLEDPRLEGRYVHSEMLTMIEAAAACVRHSAPKRPRMVQVARALECGEQLDLSNGVKYGQSRIYDSSQYINDIMRFRRMMADGNFSGYDYDMYSTEHSSRELSPSLGMPTSSGGNSEPRSFNNHRSFSDSEKP 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01865 620 FunFam proline-rich receptor-like protein kinase PERK8 334 545 - -
Arst5g01865 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 378 390 IPR008271 GO:0004672|GO:0006468
Arst5g01865 620 MobiDBLite consensus disorder prediction 30 147 - -
Arst5g01865 620 MobiDBLite consensus disorder prediction 122 147 - -
Arst5g01865 620 CDD STKc_IRAK 264 532 - -
Arst5g01865 620 ProSiteProfiles Protein kinase domain profile. 258 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01865 620 SUPERFAMILY Protein kinase-like (PK-like) 234 531 IPR011009 -
Arst5g01865 620 MobiDBLite consensus disorder prediction 44 121 - -
Arst5g01865 620 SMART serkin_6 258 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01865 620 Gene3D Phosphorylase Kinase; domain 1 229 333 - -
Arst5g01865 620 Pfam Protein tyrosine and serine/threonine kinase 261 459 IPR001245 GO:0004672|GO:0006468
Arst5g01865 620 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 233 333 - -
Arst5g01865 620 Gene3D Transferase(Phosphotransferase) domain 1 334 545 - -
Arst5g01865 620 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 165 577 IPR047117 -
Arst5g01865 620 MobiDBLite consensus disorder prediction 586 620 - -
Arst5g01865 620 MobiDBLite consensus disorder prediction 586 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01865 Arst-Chr5 23488192 23492872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01865 136 588 Trihelix Transcription Factor Family AT1G70460 56.660 1.85e-171 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Arst5g01865 PK_Tyr_Ser-Thr 7.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01865 - - adu:107488704 1013.06