Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01842 ATGTCAATGGTGGTGACAGTGAGATGCGGACACTGCACAAGCCTTCTCTCTGTGAATATGATGAAAGCTTCTTTTGTCCCTTTACACCTCTTAGCTTCTCTTTCTACTCATCATCATCATCATTCAAAAGAAGAGGATGCAAACAACAACATCGCAATGAACAGTTCATCATCCATGATGATGATCAACTACTCCTCTGATGATTGTGCAGAAGAGGATGTAACCACAATCAACAATGTTGTCAACAAACCCCCGGAGAAAAGACAGCGAACTCCATCAGCTTATAACCGATTCATCAAAGAAGAAATTAAAAGGCTAAAGGCAGAAAACCCTGAAATGGCACACAAGGAGGCTTTCAGTACCGCTGCAAAAAATTGGGCCAATTTTCCACCAACTCAGTTCAATGGAGATGAAGAAATTTGCAATCAGAAAGAGCAGTTTGCGGATCTGGACTCCCAAGTGGACCGTCATTCTCATTCTCATGAGAGCATCAACGAAGAAGGTGAAAGTTTCCATGGAAGAAAGATGCAAAGAAATTCCATCATGGCAAGGACACAACTTGAATGA 567 0.418 MSMVVTVRCGHCTSLLSVNMMKASFVPLHLLASLSTHHHHHSKEEDANNNIAMNSSSSMMMINYSSDDCAEEDVTTINNVVNKPPEKRQRTPSAYNRFIKEEIKRLKAENPEMAHKEAFSTAAKNWANFPPTQFNGDEEICNQKEQFADLDSQVDRHSHSHESINEEGESFHGRKMQRNSIMARTQLE 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01842 188 MobiDBLite consensus disorder prediction 155 188 - -
Arst5g01842 188 SUPERFAMILY HMG-box 78 132 IPR036910 -
Arst5g01842 188 Gene3D High mobility group box domain 78 172 IPR036910 -
Arst5g01842 188 FunFam Axial regulator YABBY 4 77 145 - -
Arst5g01842 188 MobiDBLite consensus disorder prediction 155 174 - -
Arst5g01842 188 Pfam YABBY protein 1 135 IPR006780 GO:0007275
Arst5g01842 188 PANTHER PROTEIN YABBY 6-RELATED 1 146 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01842 Arst-Chr5 23108003 23110926 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01842 1 188 C2C2-YABBY Transcription Factor Family AT1G23420 50.000 1.99e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Arst5g01842 YABBY 2.2e-48 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01842 K25796 - gmx:100806755 210.305