Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01841 ATGTCAACTTTGAATCAATTGTTTGATCTTCCAGAACAAATATGTTATGTCCAATGTGGATTCTGCACTACCATCTTGATGGTGAGTGTGCCATGCAGCAGCATGTCAATGGTGGTGACAGTGAGATGCGGACACTGCACAAGCCTTCTCTCTGTGAATATGATGAAAGCTTCTTTTGTCCCTTTACACCTCTTAGCTTCTCTTTCTACTCATCATCATCATCATTCAAAAGAAGAGGATGCAAACAACAACATCGCAATGAACAGTTCATCATCCATGATGATGATCAACTACTCCTCTGATGATTGTGCAGAAGAGGATGTAACCACAATCAACAATGTTGTCAACAAACCCCCGGAGAAAAGACAGCGAACTCCATCAGCTTATAACCGATTCATCAAAGAAGAAATTAAAAGGCTAAAGGCAGAAAACCCTGAAATGGCACACAAGGAGGCTTTCAGTACCGCTGCAAAAAATTGGGCCAATTTTCCACCAACTCAGTTCAATGGAGATGAAGAAATTTGCAATCAGAAAGAGCAGTTTGCGGATCTGGACTCCCAAGTGGACCGTCATTCTCATTCTCATGAGAGCATCAACGAAGAAGGTGAAAGTTTCCATGGAAGAAAGATGCAAAGAAATTCCATCATGGCAAGGACACAACTTGAATGA 669 0.4155 MSTLNQLFDLPEQICYVQCGFCTTILMVSVPCSSMSMVVTVRCGHCTSLLSVNMMKASFVPLHLLASLSTHHHHHSKEEDANNNIAMNSSSSMMMINYSSDDCAEEDVTTINNVVNKPPEKRQRTPSAYNRFIKEEIKRLKAENPEMAHKEAFSTAAKNWANFPPTQFNGDEEICNQKEQFADLDSQVDRHSHSHESINEEGESFHGRKMQRNSIMARTQLE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01841 222 MobiDBLite consensus disorder prediction 189 222 - -
Arst5g01841 222 Pfam YABBY protein 11 169 IPR006780 GO:0007275
Arst5g01841 222 Gene3D High mobility group box domain 112 205 IPR036910 -
Arst5g01841 222 FunFam Axial regulator YABBY 4 111 178 - -
Arst5g01841 222 MobiDBLite consensus disorder prediction 189 208 - -
Arst5g01841 222 PANTHER PROTEIN YABBY 6-RELATED 1 180 IPR006780 GO:0007275
Arst5g01841 222 SUPERFAMILY HMG-box 112 166 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01841 Arst-Chr5 23108003 23110926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01841 2 222 C2C2-YABBY Transcription Factor Family AT1G23420 54.113 1.79e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Arst5g01841 YABBY 3e-65 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01841 K25796 - gmx:100806755 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01841 5 23108003 23110926 Arst5g01841 5 23108003 23110926 ECH