Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01808 ATGCCTTCTTCTTCTTCTTCATCGTTTCTTATTGTCTTGCTTTGTTGTTACCATGCACTTATTACCATTATCCCTTGCGCACTTGGTGACCCAAGAACGACAGAGGCAGCGCTATTGTGCTCCAACATAATTATATCCCCACCTGTTCGCCGAGATTTCATATCAAACTTCTGGGATGCCTTGAGCTCCATGACCCCTCTTGTTTCTAACAAAAAATTTGCAGCTCTTCACAAAGGCTCTCAAAATGCCACTGTCTATGCTTTTAGTGAGTGTATGAAAGATCTCTCTAAACCAGATTGTGATGTTTGCTTCTCTGAATCCAAAACAAAGATCTTAAGATGCTCGCCGTTTCAGAGAGGCACTATTGGTGGAAGACTCTTCCTTGATGGGTGCTACATGAGGTATGATCATAAAAATTTCTTCAATGATAGTAGTGTTAGTGGTGAAGATAAAACTGTGTGTGGAACCAAGGATTTTGGTGGGGATAGGAGTGTTTACAAGGCTAATGCTATGGAACTGGTGAGGAATTTGAGCTTGGAAGCACAAAAGAAAAATAATGTTTGGTTCTTCCATGCTGGGTCTGTGAATCATAGGAATGTGAGTGTTTATGGTTTGGCTCAGTGCTGGAAATTTGTGAATGAAAGTGGATGCAAGACATGTTTGGATGAAGCTGTTACTAGGATTGAATCATGTGCTTCAAAAGAAGAAGGAAGAGTGTTGAGTGTTGGTTGTTACTTGAGGTATTCAAATGACAAGTTCTATAATGATAATTCAAGCAATGTTGTTGTCCCTTTCGGAAAACAAGGACATAGTAACCTTCCTCTGATTGTGGCTGCATCATCTTCTTCCTTGGCTCTGCTACTGATCGTTGTAACGGTTACTTTCTTTGTAAGAATGAATATATTGAAGCAGAGAAGAGAAAGAAGAAAGTTTGGTGCGCTTTTGGAAACAGTGAACCAATCTAAACTAAATATGTCATATGAAGTTCTTGAACAAGCAACAAATTACTTCAATGATTCCAATAAGCTAGGAGAAGGAGGAACAGGTTCAGTTTACAAAGGAGTTCTGCCAGATGGAAAGATTGTGGCCATAAAAAGGCTTAGCTTCATCACAACACAATGGGCAGATCATTTTTTCAATGAGGTGAATTTGATAAGTGGGATTCAACACAAAAATCTTGTGAAGCTTTTAGGGTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATATGTACCTAATGGGAGCCTCTCTGATCACTTCTGTGTTAGAAAGAAATCTGAAGGGTTGAATTGGGAAGTGAGGCATAAGATCTTGTTAGGAACTGCAGAGGGCTTGGCCTATCTTCATGAGGAATCACAAATGAGAATCATTCATAGAGATATAAAATTGGGAAATGTTCTACTTGATGAAAACTTCACACCCAAGATTGCTGATTTTGGACTTGTTAGATTGTTCCCTGAAGACAATTCTCACCTTAGCACAACCATTGCTGGTACACTGGGTTACATGGCACCAGAGTATGTAATTCTTGGGAAGTTAACTGAGAAAGCAGATGTCTACAGTTTCGGAGTGTTAGCCATTGAAATTGTATCAGGAAAAAAAATTAGGTCAATTGTTCAAAATTCAATCTCCCTTCTACATGAGGTTTGGAGCCTGTATGAAACAAAGAAGCTATGTGAAATAGTTGATCTAAGCCTAGAGGGAAATTACCCTGCAGAGGAAGCATGTAAACTCCTTAAGATAGGGTTGCTTTGTGCACAAGCTTCTCCAGAGCTGAGACCATCAATGTCACAAGTTGTGAAAATGATTAAGGACAACAATCAGGAACAGATTTCTGAACCAACGCAGCCACCATTTCTAAACCGTTGCAGCGGCGAATTCAGCAGATCTATTTTAGATGCTGAAGATAGTTTTAATGCTGGATCCTATGCTCATCATCACTCTTCAGTCTATAACACGAGTGAAAATCTGATTCAACCTTTGTACATTTCAAATCGGAGTTCAGAATATTTTAGTGCATGA 2028 0.394 MPSSSSSSFLIVLLCCYHALITIIPCALGDPRTTEAALLCSNIIISPPVRRDFISNFWDALSSMTPLVSNKKFAALHKGSQNATVYAFSECMKDLSKPDCDVCFSESKTKILRCSPFQRGTIGGRLFLDGCYMRYDHKNFFNDSSVSGEDKTVCGTKDFGGDRSVYKANAMELVRNLSLEAQKKNNVWFFHAGSVNHRNVSVYGLAQCWKFVNESGCKTCLDEAVTRIESCASKEEGRVLSVGCYLRYSNDKFYNDNSSNVVVPFGKQGHSNLPLIVAASSSSLALLLIVVTVTFFVRMNILKQRRERRKFGALLETVNQSKLNMSYEVLEQATNYFNDSNKLGEGGTGSVYKGVLPDGKIVAIKRLSFITTQWADHFFNEVNLISGIQHKNLVKLLGCSITGPESLLVYEYVPNGSLSDHFCVRKKSEGLNWEVRHKILLGTAEGLAYLHEESQMRIIHRDIKLGNVLLDENFTPKIADFGLVRLFPEDNSHLSTTIAGTLGYMAPEYVILGKLTEKADVYSFGVLAIEIVSGKKIRSIVQNSISLLHEVWSLYETKKLCEIVDLSLEGNYPAEEACKLLKIGLLCAQASPELRPSMSQVVKMIKDNNQEQISEPTQPPFLNRCSGEFSRSILDAEDSFNAGSYAHHHSSVYNTSENLIQPLYISNRSSEYFSA 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01808 675 Gene3D Phosphorylase Kinase; domain 1 298 412 - -
Arst5g01808 675 SMART serkin_6 337 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01808 675 Gene3D - 150 253 IPR038408 -
Arst5g01808 675 Gene3D - 39 140 IPR038408 -
Arst5g01808 675 FunFam Cysteine-rich receptor-like protein kinase 3 150 253 - -
Arst5g01808 675 Gene3D Transferase(Phosphotransferase) domain 1 413 619 - -
Arst5g01808 675 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 86 632 - -
Arst5g01808 675 SUPERFAMILY Protein kinase-like (PK-like) 320 605 IPR011009 -
Arst5g01808 675 ProSiteProfiles Protein kinase domain profile. 337 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01808 675 ProSiteProfiles Gnk2-homologous domain profile. 33 140 IPR002902 -
Arst5g01808 675 ProSiteProfiles Gnk2-homologous domain profile. 147 253 IPR002902 -
Arst5g01808 675 FunFam Cysteine-rich receptor-like protein kinase 2 303 412 - -
Arst5g01808 675 Pfam Salt stress response/antifungal 53 137 IPR002902 -
Arst5g01808 675 Pfam Salt stress response/antifungal 159 250 IPR002902 -
Arst5g01808 675 FunFam Cysteine-rich receptor-like protein kinase 2 413 613 - -
Arst5g01808 675 Pfam Protein kinase domain 338 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01808 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Arst5g01808 675 CDD STKc_IRAK 343 606 - -
Arst5g01808 675 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01808 Arst-Chr5 22114946 22118723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01808 27 502 Receptor kinase-like Gene Family AT1G70530 55.556 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst5g01808 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01808 - - aip:107643328 1308.51