Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01794 ATGATGAAGAACACCATGGCTTCTCTTACTCATCAACTCCCTCTTCTGCTTACCTTTGTGGCATCATATGCATTTGTTCTTACCACAACTAGTGTGTTCTCATCGAAAGTTTCAATGAAAGAAACAATTTTGGAACCTTTCAAGTGCTCCACAAACATAAAAACATGCAATGCCTCACTCTACCACATAACCTACGGGGATAATGATGATGACCAAACCATACAACATTACATATCTTCCAACTACACAAACTCCTCCCAAATCAGACCAATCACACGTGGCACAAGACAAGACCACCTCATAACAGTGCCTTGTTCTTGCAGAAACAACAACAACCTCAACGGTTATTACTATGACACAACCTACACTGTGAAGCCAAATGATAATTTCTATGACATTAATAACTTTGTTTACAGTGGTCAAGCGATGCTTATAAATGGTGTTTTGTACCCGGGTCAGAATCTGAGTATTCATATTCCCTGTGGGTGTTCAGAAATTGAGTCACAAATTGTTGTGACTTACACGGTTCAAAGAAATGATACCTCATCTGGAATAGCTAAGCTTTTGAATTCTACGGTTGCTGAGATGGAGAGTGTGAATCATCTTTTGGATCAGAACCCATCATACATAGATGTGGGTTGGGTTTTGTTTGTTCCTAGCCATTTTAATGGAATTCCACTGCCTCCAACAAAAGAAAAGAAACCAAAGTGGCAGATAATCACTGGGGTCTTAGTGAGTGTGACATTACTGTCAATGATTGCCGTCATCTTTCTCATTCTCAGGAGAAATAGGGATAACGCAGCATCCGCCACAAATAATCCAAAAAGTGTCACTAAAAGATCGATTTCCAAAAAGAACTCTGACATTCATAAAGAATACATGCAAGTAAATGTTGGTGCAGATGCTACATCATTTGAGTCAGAAAGACCAGTAATTTACTCAATTGAGGAGATAGAAGATGCCACAAATAACTTCGATGAAAACAGAAGAATTGGGGTTGGTGGATATGGCAGTGTATATTTTGGAATGTTAGGCCACAAGGAGGTTGCTGTGAAGAAGATGAAGTCCAATAAATCCAAGGAGTTCTTCGCAGAACTCAAGGCCTTATGTAAGATCCATCACATAAACATTGTGGAGTTGTTAGGGTATGCAAGTGGAGATGACCACCTTTATTTGGTGTACGAGTATGTTGCAAATGGATCTCTGAGTGATCATCTTCATGATCCTTTACTTAAAGGTCATCAGGCTCTATCTTGGTGTGCTAGGACTCAGATTGCATTGGATGCAGCAAAAGGAATTGAATACATACATGATTACACAAAAGCACAATATGTTCACCGTGATATAAAGACTACTAACATTCTTCTTGATCAGAAACTCAGAGCCAAGGTAGCAGATTTTGGCCTCGCAAAACTGGTGGAACGGACCAATGATGAAGAATTCATTGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCACCCGAATCTGTGAAAGAATTACAAGTAACCATAAAAACGGATGTGTTTGCATTTGGAGTAGTTCTATCAGAGCTGATAACAGGAAGACGTGCGCTATTTCGTGACAGCCAAAAACCCAATCAAATGGAATCTCTTATTTCACTTATTGATTCAGGTTAA 1641 0.3955 MMKNTMASLTHQLPLLLTFVASYAFVLTTTSVFSSKVSMKETILEPFKCSTNIKTCNASLYHITYGDNDDDQTIQHYISSNYTNSSQIRPITRGTRQDHLITVPCSCRNNNNLNGYYYDTTYTVKPNDNFYDINNFVYSGQAMLINGVLYPGQNLSIHIPCGCSEIESQIVVTYTVQRNDTSSGIAKLLNSTVAEMESVNHLLDQNPSYIDVGWVLFVPSHFNGIPLPPTKEKKPKWQIITGVLVSVTLLSMIAVIFLILRRNRDNAASATNNPKSVTKRSISKKNSDIHKEYMQVNVGADATSFESERPVIYSIEEIEDATNNFDENRRIGVGGYGSVYFGMLGHKEVAVKKMKSNKSKEFFAELKALCKIHHINIVELLGYASGDDHLYLVYEYVANGSLSDHLHDPLLKGHQALSWCARTQIALDAAKGIEYIHDYTKAQYVHRDIKTTNILLDQKLRAKVADFGLAKLVERTNDEEFIATRLVGTPGYLPPESVKELQVTIKTDVFAFGVVLSELITGRRALFRDSQKPNQMESLISLIDSG 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01794 546 Gene3D LysM domain 167 223 IPR036779 -
Arst5g01794 546 Gene3D Transferase(Phosphotransferase) domain 1 397 545 - -
Arst5g01794 546 ProSiteProfiles Protein kinase domain profile. 325 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01794 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Arst5g01794 546 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Arst5g01794 546 FunFam Kinase family protein 300 396 - -
Arst5g01794 546 SUPERFAMILY Protein kinase-like (PK-like) 307 531 IPR011009 -
Arst5g01794 546 PIRSF TyrPK_CSF1-R 329 418 - -
Arst5g01794 546 PIRSF TyrPK_CSF1-R 30 139 - -
Arst5g01794 546 PIRSF TyrPK_CSF1-R 414 522 - -
Arst5g01794 546 Pfam LysM domain 174 219 IPR018392 -
Arst5g01794 546 CDD LysM 172 218 IPR018392 -
Arst5g01794 546 SMART LysM_2 173 219 IPR018392 -
Arst5g01794 546 Pfam Protein kinase domain 326 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01794 546 SUPERFAMILY LysM domain 172 219 IPR036779 -
Arst5g01794 546 ProSiteProfiles LysM domain profile. 172 218 IPR018392 -
Arst5g01794 546 Gene3D Phosphorylase Kinase; domain 1 303 396 - -
Arst5g01794 546 SMART serkin_6 325 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01794 546 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 36 544 IPR044812 GO:0019199|GO:0045087
Arst5g01794 546 FunFam PTI1-like tyrosine-protein kinase 3 397 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01794 Arst-Chr5 21830212 21834247 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01794 305 528 Receptor kinase-like Gene Family AT1G51940 58.036 8.03e-88 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Arst5g01794 Pkinase 5.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01794 - - gmx:100800907 728.783