Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01774 ATGCAGGTCAAAATCTTTGGGATAAGAGGTTGCTGTTTTGGCATTGCAAACATGATTTTGGTTAAGAGAATGAGAGAAACATTATACTCTTCCCTTATTCTTCAGGATATATCATTTTTTGACTCTGAAACAGTTGGTGATTTGACAAGTAGACTCGGGGCAGATTGTCAACAAGTGTCTAGGGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTCAGGGGACAGGTTCATTAATCTACTTGGTGATTTTGTCTTGGCCACTTGGTTTATGTACGTTGATGATATGCATCCTGTTAGGAGCAGTTATGGTACATTATGGAAGGTACCAGAAAAAGGCAGCAAGGCTGATCCAAGAAGTCACTGCTTCTGCAAATGATGTAGCTCAAGAGACCTTGTCTCTCATTCGAACTGTCCGTGTTTATGGAACAGAAGAAGTAGAACATGGAAGGTACAAATGGTGGCTGGAGAAATTAGCTGACATAAGCCTGCGACAAAGTGCTGCATATGGGTTTTGGAATTTAAGCTTCAATGCTCTTTATCATTCAACTCAGGTTATCGCTGTGCTGTTTGGAGGGATGTCTATTCTTGCTGGACATATTACTGCTGAGAAACTTACTAAGTTTATACTATACAGTGAATGGCTAATTTATTCAACCTGGTGGGTGGGAGACAATATTTCCAATTTGATGCAATCTGTTGGAGCTAGTGAAAAAGTATTCCATTTAATGGATCTCTTACCTAGCAGCCAATTCACAGAAAGAGGAGTAAAGTTGCAGGGGTTGATGGGGCAAATCGAGTTTCTAAATGTATCTTTTCGCTACCCTTCAAGGCCAACGGTATCTGTGGTGCAACATGTAAACTTTGTGGTCCATCCCAGTGAGGTGGTTGCAATTGTTGGTCTTAGTGGTAGCGGAAAAAGCACACTGGTGAACCTTTTGCTTCGTCTCTATGAGCCGACAAGTGGCCAGATTTTGGTAGATGGCATTCCTATTAAAGACTTCGACATCATGTGGTGGAGAGGGAGAATAGGATATGTTGGACAGGAACCCAAGCTTTTCCGGATGGATATTAGTTCAAACATCAGATATGGATGTACTCGCGATGTAACACAGGAGGATGTTGAATGGGCTGCAAAGGAGGCCTATGCTCATGATTTCATCACAGCACTTCCTAACGGTTATGAAACAGTTGTTGACGACGATCTATTAAGTGGGGGTCAAAAGCAGCGAATCGCTATTGCTAGAGCCATCCTTCGGGACCCAAAAATATTGATCCTTGATGAAGCCACCAGTGCACTGGATGCTGAGAGTGAACATAACGTTAAGGGTGTTCTTCGATCCGTCAGAAGTGACTCTACATCAAGGAGAAGTGTCATAGTCATTGCACACAGGCTTTCCACCATACAAGCCGCTGACAGGATTGTGGTAATGGATGGTGGTCAAGTTGTTGAGATTGGAAGTCATAGAGAACTTCTCCTAAAAGATGGTTTATATGCTCGGTTGACTCGAAAACAGGCAGATGCCATGGCATGA 1542 0.4248 MQVKIFGIRGCCFGIANMILVKRMRETLYSSLILQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGSLIYLVILSWPLGLCTLMICILLGAVMVHYGRYQKKAARLIQEVTASANDVAQETLSLIRTVRVYGTEEVEHGRYKWWLEKLADISLRQSAAYGFWNLSFNALYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDNISNLMQSVGASEKVFHLMDLLPSSQFTERGVKLQGLMGQIEFLNVSFRYPSRPTVSVVQHVNFVVHPSEVVAIVGLSGSGKSTLVNLLLRLYEPTSGQILVDGIPIKDFDIMWWRGRIGYVGQEPKLFRMDISSNIRYGCTRDVTQEDVEWAAKEAYAHDFITALPNGYETVVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSVRSDSTSRRSVIVIAHRLSTIQAADRIVVMDGGQVVEIGSHRELLLKDGLYARLTRKQADAMA 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01774 513 Gene3D - 258 512 IPR027417 -
Arst5g01774 513 Gene3D ABC transporter type 1, transmembrane domain 5 247 IPR036640 GO:0005524|GO:0016020
Arst5g01774 513 Pfam ABC transporter transmembrane region 7 219 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst5g01774 513 CDD ABC_6TM_TAP 7 242 - -
Arst5g01774 513 SUPERFAMILY ABC transporter transmembrane region 7 250 IPR036640 GO:0005524|GO:0016020
Arst5g01774 513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 260 508 IPR027417 -
Arst5g01774 513 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 8 234 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst5g01774 513 ProSitePatterns ABC transporters family signature. 406 420 IPR017871 GO:0005524|GO:0016887
Arst5g01774 513 SMART AAA_5 295 484 IPR003593 GO:0016887
Arst5g01774 513 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 268 507 IPR003439 GO:0005524
Arst5g01774 513 PANTHER ABC TRANSPORTER B FAMILY 8 505 IPR039421 -
Arst5g01774 513 FunFam Multidrug ABC transporter ATP-binding protein 260 512 - -
Arst5g01774 513 Pfam ABC transporter 287 434 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01774 Arst-Chr5 21275737 21281415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01774 23 511 Calmodulin-binding Proteins AT2G36910 34.531 2.77e-72 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01774 - - gmx:100775951 890.567