Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01773 ATGCCTCTTCTACTCTCAGCTTCACAACCTCCCCTACTCCCTCTCATCCCACACAGTAATAAAACTCTCATCACACTTCCTAGAAAGCGCTTTGGTTTCGCTCCCAACACCTTAACAACCCCACCCTCTCTTCGTTCCAGGCGCATTCTCCCTAAATCTTCTGCTTCTTCCTCTTCTTCCATCAACGGTGTTTCCCTTGAGGACATTCCAGAACATTCCAGAAACGAAGAATCAACTTCTCCTACTCGGGATGAGTTCCTTCTCCTCCAAACGCTCCGAACCTGGCTCCGCTTCCTCCCTTCCATTCTCCCCGGTGGATCCTGGTGGAACTTCGACGACGACATCGAAATCGAGCTACTGGCTCAGCCGGTTTCTGTCTGGCGCGCACTCGGCAAGATGTGGCACCTCGTCGCGCGTGACCGCTGGATCATCTTCGCCGCCTTCACCGCTCTCATTTTCGCGGCGGTGTCTGAGATTTCGATACCGCATTTCTTGACGGCGTCGATTTTCACGGCGCAGAGCGCGGAGATTGCGGTTTTTCACCAGAATGTGCGGCTTTTGGTTCTGTTGTGTGTGATCTCGGGAATATGCAGTGGGATAAGAGGTTGCTGTTTTGGCATTGCAAACATGATTTTGGTTAAGAGAATGAGAGAAACATTATACTCTTCCCTTATTCTTCAGGATATATCATTTTTTGACTCTGAAACAGTTGGTGATTTGACAAGTAGACTCGGGGCAGATTGTCAACAAGTGTCTAGGGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTCAGGGGACAGGTTCATTAATCTACTTGGTGATTTTGTCTTGGCCACTTGGTTTATGTACGTTGATGATATGCATCCTGTTAGGAGCAGTTATGGTACATTATGGAAGGTACCAGAAAAAGGCAGCAAGGCTGATCCAAGAAGTCACTGCTTCTGCAAATGATGTAGCTCAAGAGACCTTGTCTCTCATTCGAACTGTCCGTGTTTATGGAACAGAAGAAGTAGAACATGGAAGGTACAAATGGTGGCTGGAGAAATTAGCTGACATAAGCCTGCGACAAAGTGCTGCATATGGGTTTTGGAATTTAAGCTTCAATGCTCTTTATCATTCAACTCAGGTTATCGCTGTGCTGTTTGGAGGGATGTCTATTCTTGCTGGACATATTACTGCTGAGAAACTTACTAAGTTTATACTATACAGTGAATGGCTAATTTATTCAACCTGGTGGGTGGGAGACAATATTTCCAATTTGATGCAATCTGTTGGAGCTAGTGAAAAAGTATTCCATTTAATGGATCTCTTACCTAGCAGCCAATTCACAGAAAGAGGAGTAAAGTTGCAGGGGTTGATGGGGCAAATCGAGTTTCTAAATGTATCTTTTCGCTACCCTTCAAGGCCAACGGTATCTGTGGTGCAACATGTAAACTTTGTGGTCCATCCCAGTGAGGTGGTTGCAATTGTTGGTCTTAGTGGTAGCGGAAAAAGCACACTGGTGAACCTTTTGCTTCGTCTCTATGAGCCGACAAGTGGCCAGATTTTGGTAGATGGCATTCCTATTAAAGACTTCGACATCATGTGGTGGAGAGGGAGAATAGGATATGTTGGACAGGAACCCAAGCTTTTCCGGATGGATATTAGTTCAAACATCAGATATGGATGTACTCGCGATGTAACACAGGAGGATGTTGAATGGGCTGCAAAGGAGGCCTATGCTCATGATTTCATCACAGCACTTCCTAACGGTTATGAAACAGTTGTTGACGACGATCTATTAAGTGGGGGTCAAAAGCAGCGAATCGCTATTGCTAGAGCCATCCTTCGGGACCCAAAAATATTGATCCTTGATGAAGCCACCAGTGCACTGGATGCTGAGAGTGAACATAACGTTAAGGGTGTTCTTCGATCCGTCAGAAGTGACTCTACATCAAGGAGAAGTGTCATAGTCATTGCACACAGGCTTTCCACCATACAAGCCGCTGACAGGATTGTGGTAATGGATGGTGGTCAAGTTGTTGAGATTGGAAGTCATAGAGAACTTCTCCTAAAAGATGGTTTATATGCTCGGTTGACTCGAAAACAGGCAGATGCCATGGCATGA 2118 0.4551 MPLLLSASQPPLLPLIPHSNKTLITLPRKRFGFAPNTLTTPPSLRSRRILPKSSASSSSSINGVSLEDIPEHSRNEESTSPTRDEFLLLQTLRTWLRFLPSILPGGSWWNFDDDIEIELLAQPVSVWRALGKMWHLVARDRWIIFAAFTALIFAAVSEISIPHFLTASIFTAQSAEIAVFHQNVRLLVLLCVISGICSGIRGCCFGIANMILVKRMRETLYSSLILQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGSLIYLVILSWPLGLCTLMICILLGAVMVHYGRYQKKAARLIQEVTASANDVAQETLSLIRTVRVYGTEEVEHGRYKWWLEKLADISLRQSAAYGFWNLSFNALYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDNISNLMQSVGASEKVFHLMDLLPSSQFTERGVKLQGLMGQIEFLNVSFRYPSRPTVSVVQHVNFVVHPSEVVAIVGLSGSGKSTLVNLLLRLYEPTSGQILVDGIPIKDFDIMWWRGRIGYVGQEPKLFRMDISSNIRYGCTRDVTQEDVEWAAKEAYAHDFITALPNGYETVVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSVRSDSTSRRSVIVIAHRLSTIQAADRIVVMDGGQVVEIGSHRELLLKDGLYARLTRKQADAMA 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01773 705 SMART AAA_5 487 676 IPR003593 GO:0016887
Arst5g01773 705 Pfam ABC transporter transmembrane region 144 411 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst5g01773 705 Gene3D - 458 701 IPR027417 -
Arst5g01773 705 SUPERFAMILY ABC transporter transmembrane region 132 442 IPR036640 GO:0005524|GO:0016020
Arst5g01773 705 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 145 426 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst5g01773 705 MobiDBLite consensus disorder prediction 37 80 - -
Arst5g01773 705 FunFam Multidrug ABC transporter ATP-binding protein 452 704 - -
Arst5g01773 705 CDD ABC_6TM_TAP 147 434 - -
Arst5g01773 705 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 460 699 IPR003439 GO:0005524
Arst5g01773 705 Gene3D ABC transporter type 1, transmembrane domain 290 457 IPR036640 GO:0005524|GO:0016020
Arst5g01773 705 ProSitePatterns ABC transporters family signature. 598 612 IPR017871 GO:0005524|GO:0016887
Arst5g01773 705 MobiDBLite consensus disorder prediction 37 66 - -
Arst5g01773 705 FunFam ABC transporter B family member 26, chloroplastic 126 445 - -
Arst5g01773 705 Pfam ABC transporter 479 626 IPR003439 GO:0005524
Arst5g01773 705 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 452 700 IPR027417 -
Arst5g01773 705 PANTHER ABC TRANSPORTER B FAMILY 138 697 IPR039421 -
Arst5g01773 705 Gene3D ABC transporter type 1, transmembrane domain 116 289 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01773 Arst-Chr5 21275737 21282200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01773 215 703 Calmodulin-binding Proteins AT2G36910 34.531 1.14e-70 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01773 - - gmx:100813359 1083.94