Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01746 ATGTCAGAACAGATGCACAAATTTGATCCAGGAAGTCAGCAGTTTGAATTCTCAGAAAATACAAATCAGATTGGTTCTTCATGTTTAGAAAGTGAACAAAAGGTGCTAATCACTATGAAGAATAGGACTGTCTTTGATGAAAAGTTACATCAAGGTTCTGATAATATGAGAGGGAATTCTCTTATTCAACTATCTGCTCCTCCTCAATATGTTTTGGTAAAGAGTTCTCAGATTGGAGAAGGTTCTTGCGATAAAAAAGTTACCGTCGGGCCAGAACTGGCCTTTCGAGATTTATCCGATTATAACTTACAAAGGAAATCTCAACCAGCCTCCCAAAATGTTCAAAATGGATCCGTAGAATCAACTAACTCAATAAGTAGCCTTTTTGTTCAGGATCAAATGCAGCCGAGTCCTTCACAAGAGAACATGAGCTCAGTGATTGAACACTTGGACCTGCCTACTGGGGATGTTGCAGGAAATGATGGTCCTAACTGTTTACAAAGAAAGTCTAAAAGGCTGACTCAAATGAGGTTAAAGTCGGAGGACAGCAGAACTCCAAAATTACTGAAGGGAAAATATACACTCAGGTCTTCGAGAAGCAGTGACAGAGCTTTGCAGTCGCAGACTCGAGAAAAATGTAAAGTACCTGAACTAAGTAGCGACTTGATTGATGTTAAAAATGTTGGAGAGAAGAAGAGAAGAGGGAGGAAGAGAAAACAATGGGGAGGAGAGGGAATTATTGATGAATTTTCAAGAATAAGGAGTCACTTACGATATTTATTGAACCGAGTAAGCTATGAGCAAAGCTTGATTGATGCTTATTCTGGCGAGGGCTGGAAAGGATACAGCATTGAAAAATTAAAGCCTGAGAAGGAGCTTCAACGAGCTAAGTCTGAAATTCTTAGGAGAAAATTGAAAATCAGGGATCTATTTTGGAATTTGGGTTTATTGTGTGCTGAAGGAAAGCTTCCAGAGTCTTTGTTTGATTCGGAAGGAGCAATACGCAGTGACGATATTTTCTGTGCAAAATGCGGGTCCAAAGAGCTGACCACTGATAATGATATAATTCTCTGTGATGGTGCTTGTGACCGTGGATTTCACCAATGCTGTTTAAATCCTCCATTGTTAACTAAAGACATTCCGCCGGGCCATGATATTTGGCTATGCCCAGGATGTAACTGCAAACTTGAATGCATTAAACTTCTTAATGACGTCTTAGGAACAAGTCTTTCTATTAGGGACACCTGGGAGCGGGTTTTTCCTGAAGCAACAGAGGCTGCTGGAACCAATGCGGGCCATAGCCTGGGACTTCCTTCAGTTGATTCTGATGACAACGATTACAAGCCTAAAGCTCCGGAAGATGAAGAGGTTGAAGGTGGAGAATCAAGCTCTGATGGATCTGATTATGCTTCTGATTCTGAGAAATTGAAAGATTTGCATTCAGAGGATGATGATTATGATCCAAATGCTCCAGATACTGATAGGGGAGCCTCTGAAGAAAATTCAAGCTCTGGTTTCATATCTGATGACACTGTGGACGAAGCTCAAATGCTTGCACCACAGGATGATATTATGAAGTGTAAAAGCTCTCGCAGTAAAAAGTTCAAAGTTGGTTAG 1617 0.4063 MSEQMHKFDPGSQQFEFSENTNQIGSSCLESEQKVLITMKNRTVFDEKLHQGSDNMRGNSLIQLSAPPQYVLVKSSQIGEGSCDKKVTVGPELAFRDLSDYNLQRKSQPASQNVQNGSVESTNSISSLFVQDQMQPSPSQENMSSVIEHLDLPTGDVAGNDGPNCLQRKSKRLTQMRLKSEDSRTPKLLKGKYTLRSSRSSDRALQSQTREKCKVPELSSDLIDVKNVGEKKRRGRKRKQWGGEGIIDEFSRIRSHLRYLLNRVSYEQSLIDAYSGEGWKGYSIEKLKPEKELQRAKSEILRRKLKIRDLFWNLGLLCAEGKLPESLFDSEGAIRSDDIFCAKCGSKELTTDNDIILCDGACDRGFHQCCLNPPLLTKDIPPGHDIWLCPGCNCKLECIKLLNDVLGTSLSIRDTWERVFPEATEAAGTNAGHSLGLPSVDSDDNDYKPKAPEDEEVEGGESSSDGSDYASDSEKLKDLHSEDDDYDPNAPDTDRGASEENSSSGFISDDTVDEAQMLAPQDDIMKCKSSRSKKFKVG 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01746 538 MobiDBLite consensus disorder prediction 443 457 - -
Arst5g01746 538 SMART PHD_3 340 393 IPR001965 -
Arst5g01746 538 MobiDBLite consensus disorder prediction 468 494 - -
Arst5g01746 538 MobiDBLite consensus disorder prediction 427 538 - -
Arst5g01746 538 Pfam PHD-finger 340 395 IPR019787 -
Arst5g01746 538 CDD PHD_PRHA_like 340 392 IPR045876 -
Arst5g01746 538 FunFam Homeobox protein HAT3.1 321 399 - -
Arst5g01746 538 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 334 397 IPR013083 -
Arst5g01746 538 MobiDBLite consensus disorder prediction 174 189 - -
Arst5g01746 538 MobiDBLite consensus disorder prediction 152 211 - -
Arst5g01746 538 ProSitePatterns Zinc finger PHD-type signature. 341 392 IPR019786 -
Arst5g01746 538 MobiDBLite consensus disorder prediction 495 510 - -
Arst5g01746 538 SUPERFAMILY FYVE/PHD zinc finger 333 400 IPR011011 -
Arst5g01746 538 ProSiteProfiles Zinc finger PHD-type profile. 338 395 IPR019787 -
Arst5g01746 538 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 177 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01746 Arst-Chr5 20739298 20749499 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01746 248 476 Homeobox Transcription Factor Family AT3G19510 59.091 4.68e-88 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst5g01746 PHD 3.8e-09 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01746 - - adu:107488674 1051.2