Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01720 ATGGAACTAGCAAAGGCAACCATAGCAGCTTGTCAATTCCACCAACACCACCAGTACCAGAACAGCAAGTGCATCAAGATCTTTTGGGGCTTGACGATTCTCCTCCTACTAACTCTATCCAATCAGTCAGCTGCATCAGATGCCAACATCGTCAAGAGCTTACCAGGCTTCCCCGGGGAGCTACCTTTCCTGCTCGAGACAGGGTACATAGGCGTAGGGGAAGTAGATGAGGTTGAGCTATTTTATTACTTCATAGAGTCAGAGGGGGAGCCAGAAGATGATCCACTCGTGCTTTGGCTCACAGGAGGCCCTGGTTGCTCAGCCCTCTATGGTCTCATGTATGAGACTGGTCCATTATCTTTCGATTACGGAAGGTCTAGTGGGGGAAACAAACCAGTTTTAACTTTGAACGATTACTCATGGACTAAGGTTGCCAACATTATCTTCTTGGATGCGCCCGTTGGCACGGGATTTTCATATGCCAAAACTTCATCTGGATACAGCACGAGTGACACAAAGTCAGCTGCAGACATTTATATGTTTCTGAGAAAGTGGCTTGTGGCTCACCCTAGGTTTCGTGCAAATCCTCTCTACATTGCTGGTGATTCTTATAGCGGAATCACGGTTCCAGTCCTTGTTAAAGAAATCTCTGATGGTAACAAAGCTGGAACATTGTCACCCATCAGTCTCAGAGGTTACATTCTAGGAAACCCATTAACTGATATCGGATATGATATAAACTCGAGGGTTAAGTTTTCCCACAGAGTTGGACTTCTATCTGATGAACTCTATCTGGCACTGGAGCTTTCTTGTAAAGGAGAGTATGTTCGCCCAAATAAAAGTGAAGGTGCATGCATCAGCAATCTTGAGATAATGGATCTGTGCTTGAAAGACATATTCACTCCGATGATATTGGAGAGAAAGTGTAGCCCGTTCTCATCAGCAAAGCCGAACAACATTCTTAAGTGGGGTTCAACCACAACCCCATCTTCAGATACACTTCTTTTAGAACTTCGACGCTGCAGGGACTATGACTACTTGTTAGTAAACATCTGGGCTAATGATGGAGAAGTTCAAGAAGCTCTGCATGTTAGAAACGGAACTATAAAAACGTGGGAGATGTGTAGTAAAAACTTAGCTTATGTGCATGACATAACAAGTAGTGTTGAATATCACCTTAACTTTACCAGCGAAGACCTTAGAGCCATCATTTACAGCGGAGATCATGATCTGATTGTTCCATATGTGGGCACTGAGGAATGGATACAATCTCTGAATTTGACTGTTTCTTCCGATGATGTGTGGAGGCCATGGTTTCAGGATGGACAAGTTGCAGGTTACACGGAGATATACACAAAGAATAAGTACGTGATGACACTTGCTACTGTCAAGGCAAGAAAATAG 1404 0.4395 MELAKATIAACQFHQHHQYQNSKCIKIFWGLTILLLLTLSNQSAASDANIVKSLPGFPGELPFLLETGYIGVGEVDEVELFYYFIESEGEPEDDPLVLWLTGGPGCSALYGLMYETGPLSFDYGRSSGGNKPVLTLNDYSWTKVANIIFLDAPVGTGFSYAKTSSGYSTSDTKSAADIYMFLRKWLVAHPRFRANPLYIAGDSYSGITVPVLVKEISDGNKAGTLSPISLRGYILGNPLTDIGYDINSRVKFSHRVGLLSDELYLALELSCKGEYVRPNKSEGACISNLEIMDLCLKDIFTPMILERKCSPFSSAKPNNILKWGSTTTPSSDTLLLELRRCRDYDYLLVNIWANDGEVQEALHVRNGTIKTWEMCSKNLAYVHDITSSVEYHLNFTSEDLRAIIYSGDHDLIVPYVGTEEWIQSLNLTVSSDDVWRPWFQDGQVAGYTEIYTKNKYVMTLATVKARK 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01720 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 149 IPR001563 GO:0004185|GO:0006508
Arst5g01720 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 185 210 IPR001563 GO:0004185|GO:0006508
Arst5g01720 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 150 160 IPR001563 GO:0004185|GO:0006508
Arst5g01720 467 FunFam Serine carboxypeptidase-like 19 44 315 - -
Arst5g01720 467 Pfam Serine carboxypeptidase 55 464 IPR001563 GO:0004185|GO:0006508
Arst5g01720 467 SUPERFAMILY alpha/beta-Hydrolases 51 463 IPR029058 -
Arst5g01720 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 50 465 IPR001563 GO:0004185|GO:0006508
Arst5g01720 467 Gene3D alpha/beta hydrolase 59 465 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01720 Arst-Chr5 20408996 20412264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01720 348 465 Calmodulin-binding Proteins AT2G22960 46.610 6.97e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01720 K16296 - cave:132177555 527.324