Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01677 ATGGCTAACCAGCAACAACAACCTCTTCTAAGCAATAATAATAAGACTCCGAAATTCCTATCCCTTCTCCTCACTACTGTAGTTGTTGTAGTTGTAGTTGGAATTGGTGTCCTTGCCTCATCATCCCTTATTGCTAATTCATATCTCAGCACCAAACCCAGTTCCGATCTCTGTCAACACGCCGTTAACAGAGCAACCTGCTTGGCCCATGTCTCCGAAATAGCTCAAGGTCACATCCTGGCAACCACAAAAGACAACTACAATCTTCTCCAATCCTTCCTTGTCAAGTCCACCTCAGGCATCCAAGAAGCCATGACCACAGTCAACGCCGTCAAGATCCGCCTCAACGCCACTCCACGCCAGGAAGCAGCCTTGCAAGTCTGTGCAGACCTCATGGACTTGTCCATTGGTAGAGTTCTTCAATCAGTGGTGGCTCTCACTAAAAGGAACACTACTCATTCTCTGCAAGATGCACACACATGGCAGAGCAGTGTTCTCACCAACCATGCCACTTGCTTGGATGGCTTAGAAGGCTTCTCTGCTCGTGCCATTATGGAGCCTCAACTCTCGGACCTCATGTCCAGGGCAAGAACCTCTCTCGCCATGTTTGTTGCAGTCTTGCCAACGAAGGCCCATCAGCACCAACTCCTTGAGGAGCCACTCAACCGAGAGTTTCCCTCATGGGTCACACGCACCGATCGGAGGCTTTTGGAGTCTGTGGCTGCTGATATAAAGGCTAATGTTGTGGTGGCCAAGGATGGAAGCGGCAAGTTCAAGACGGTGGCGGAGGCTGTGGCTTCTGCACCTGATAACGGTAAAACAAGGTACGTAATATATGTGAAGAAGGGAACGTACAAAGAGAATGTTGAGATCAGTTCAAAGAAGAAGAACGTCATGCTTGTTGGTGACGGTATGGATGCAACCATTATCACCGGCAGCTTGAACTTTGTCGATGGAACTGGCACCTTCCAATCCGCCACCGTCGCCGCCGTTGGTGATGGGTTTATAGGGCAAGACATTTGGTTTCAAAACACGGCAGGGCCAGAGAAGCACCAGGCGGTGGCACTCCGTGTGGGAGCGGACACCTCCGTGATCAACCGGTGCCGCATCGATGCCTACCAGGACACTCTGTACACCCACAGCAACAGGCAGTTCTACCGTGATTGCGTCATCACCGGCACTATCGACTTCATCTTTGGAAATGCTGCTGTTGTGTTCCAGAATTGCAACCTGGTGGCTCGAAAGCCCATGAGCAACCAAAAGAACATGGTGACGGCCCAAGGACGCGAAGACCCCAACCAAAACACAGGGACCTCCATTCAGCAGTGCAAAATAACAGCGAGTTCGGATCTGAAGCCCGTGGTGGGGTCCATCAAGACTTATCTGGGGCGGCCATGGAAGAAGTATTCAAGAACGGTTGTGATGCAATCTTCAATAGATGGGCATATTGACCCCGCAGGATGGTCTGAATGGGATGATAAGACTAAGGACTATTTGGAAACTCTGTATTATGGAGAGTACATGAACAGTGGTGCTGGTGCTGGCACCAGCAAGAGGGTTACGTGGCCTGGTTACCACATCATCACCAGTGCCGCAGAGGCTAGCAAGTTCACAGTGGCTCAGCTCATCCAAGGCGATGTTTGGTTGCAGAACACCGGTGTTAACTTCATTACCGGCCTCTAG 1683 0.5074 MANQQQQPLLSNNNKTPKFLSLLLTTVVVVVVVGIGVLASSSLIANSYLSTKPSSDLCQHAVNRATCLAHVSEIAQGHILATTKDNYNLLQSFLVKSTSGIQEAMTTVNAVKIRLNATPRQEAALQVCADLMDLSIGRVLQSVVALTKRNTTHSLQDAHTWQSSVLTNHATCLDGLEGFSARAIMEPQLSDLMSRARTSLAMFVAVLPTKAHQHQLLEEPLNREFPSWVTRTDRRLLESVAADIKANVVVAKDGSGKFKTVAEAVASAPDNGKTRYVIYVKKGTYKENVEISSKKKNVMLVGDGMDATIITGSLNFVDGTGTFQSATVAAVGDGFIGQDIWFQNTAGPEKHQAVALRVGADTSVINRCRIDAYQDTLYTHSNRQFYRDCVITGTIDFIFGNAAVVFQNCNLVARKPMSNQKNMVTAQGREDPNQNTGTSIQQCKITASSDLKPVVGSIKTYLGRPWKKYSRTVVMQSSIDGHIDPAGWSEWDDKTKDYLETLYYGEYMNSGAGAGTSKRVTWPGYHIITSAAEASKFTVAQLIQGDVWLQNTGVNFITGL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01677 560 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 202 IPR035513 -
Arst5g01677 560 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 206 IPR035513 -
Arst5g01677 560 ProSitePatterns Pectinesterase signature 2. 391 400 IPR033131 -
Arst5g01677 560 SUPERFAMILY Pectin lyase-like 244 559 IPR011050 -
Arst5g01677 560 CDD PMEI-like_4 58 206 - -
Arst5g01677 560 ProSitePatterns Pectinesterase signature 1. 272 291 IPR018040 -
Arst5g01677 560 PANTHER PECTINESTERASE 29 550 - -
Arst5g01677 560 Pfam Pectinesterase 247 546 IPR000070 GO:0030599|GO:0042545
Arst5g01677 560 SMART PMEI_2 49 202 IPR006501 GO:0004857
Arst5g01677 560 Pfam Plant invertase/pectin methylesterase inhibitor 56 191 IPR006501 GO:0004857
Arst5g01677 560 NCBIfam pectinesterase inhibitor domain 47 181 IPR006501 GO:0004857
Arst5g01677 560 Gene3D - 240 560 IPR012334 -
Arst5g01677 560 FunFam Pectinesterase 241 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01677 Arst-Chr5 19602912 19605512 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01677 7 556 Carbohydrate Esterase AT1G11580 57.143 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01677 K01051 - gmx:100815836 786.178