Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01672 ATGTTTCCCACGAACGTGTTCGATTCTCATCAGCAGCACATGATGCTTGATATGTCATCGTCTCACAATGAGAGTGATTTGGGAATAAGGACCGGAGATGATGAGTTCTTTGACATTAAATCTGCTACTGAGATCGTCATGGAAGCTCCTTCCGGTGATGATGAGCAAGATCCCAACCAACGACCCAAAAAGAAGGGTTACCATCGCCACACACAGCACCAGATACAAGAAATGGAAGCGTTCTTCAAGCAGTGTCCACACCCAGATGACAAGCAAAGAAAGGAGCTGAGCCGTGAGCTGGGATTAGAGCCATTGCAAGTAAAGTTTTGGTTCCAAAACAAGCGGACACAGATGAAGGCACAACATGAGCGACACGAGAACGCTATATTAAAGGCTGAGAACGAGAAGCTTCGTGCCGAGAACAGCAGATACAAGGAGGCCCTAAGCAATGCTACTTGCCCCAACTGTGGAGGACCTGCTGCCCTTGGTGAAATGTCCTTTGACGAGCAGCACCTCCGGATTGAGAATGCTCGTCTCAAACAAGAGATTGATAGGATTTCGGGAATAGCGGAGAAATATGTTGGGAAGCCAGTGACTTCCTCTCACAATAGCAATCACATGGCTCCACATTCTCGCTCGCTTGATCTTGGAGTTGGTAGCTATGGTGGAGGATCACAGTCCTCAGCCGGCGGCATGGTTGGAGAGATGTATGGCGGCAGTGAGCTTCTGAGGCCGTTCCCAGTTCCTTGTGATTCGGACAAACCCAGGATTGTGGAGCTTGCTGTGGCAGCTATGGAGGAACTAACAAGACTAGCTCAGGTTGGAGATCCTTTGTGGGTCCAAAGCAACCAGCACTGTACTGAGATTCTAAACGAAGATGAATACTTGAGGACCTTTAGAGTTATAGGCCCAAAAGCGTTGGGCTTGAGATCTGAATCCTCAAGAGAATCCGCGGTGATTATCATGAATCACACTAAACTGGTTGAGATACTAATGGATGTGAATCAATGGTCAACAATGTTCTGTGGTATTGTGTCAAGAGCGTTGACACTTGAAGTGCTTTCAACCGGAGTGGCAGGAAACTATAACGGAGCGTTGCAAGTGATGTCGGCTGAGTTCCAGGTGGCATCGCCTCTTGTTCCAAGCAGAGAGAACTATTTCGTAAGGTACTGCAAGGAACATCCGGATGGGAGATGGACAGTGGTAGATGTGTCGTTGGAGAATGAGAGCAGAAGCCGAAGAAGCAGCCGAAGAAGGCCCTCTGGCTGCTTAATTGAAGAACTCCCAAACGGCTACTCCAAGGTGACATGGATTGAGCATGTAGAAGTGGATGACAGAGGCGTGCATAGCCTCTACAAGCCATTGGTGAAGTGCGGGCTGGCCTTTGGAGCTAAGAGGTGGATGGCGACGTTAGAGAGACAATGCGAACGTGTTGCGAGTTACATAGGAGGAGGAGCAGGGGAGCTGTGTGGTACGAGTGCGGAGGGAAGGAGGAGCATGCTGAAGTTGGCAGAGAGAATGGTGATGAGCTTCTGCACTGGAGTGGGAGCTTCCACGGCACATGCATGGACCACTCTGTCGTCGGATATGGATGATGTGAGGGTTATGACGAGGAAGAGCATGGACGACCCTGGCAGACCCCCTGGCATTGTCCTCTGCGCTGCCACTTCCTTCTCCCTCCCTGTTCCTCCCAACACTCTCTTTCATTTCCTCAGAGATCAGAACTCCCGAAGCCAGTGGGATATCCTCTCCAACCGAGGCCTTGTTCAAGAAATCACACACATAGCAAGCTCTGCCAACGTGCTCTCTCTGCTTCGCGTCAATAGTGTGAATTCGAGCCAAAGCAACATGCTGATACTTCAGGAGAGTTGTACAGACTGCAGTGGATCCTATGTGGTATATGCACCCGTGGACATGGCTGCCATGAATATAATTCTTAGTGGCGGGGATCCAGATTACCTGGCCCTGCTTCCCTCGGGTTTTGCGATTCTTCCTGATGGCCTTGCTGCATCTTCTGGAGGGTCTCTCCTCACGGTTGCGTTTCAGATCTTGGTTGACTCCGCCCCAACCGCCAAGCTATCCCTGGGTTCAGTCGCCACTGTTAACACTTTAATTAAGTGCACCGTTGAAAGAATCAAAGCTGCTGTCATTTCTGACACTACCTCATTTCACAACCTTGCTTCCTAG 2187 0.4998 MFPTNVFDSHQQHMMLDMSSSHNESDLGIRTGDDEFFDIKSATEIVMEAPSGDDEQDPNQRPKKKGYHRHTQHQIQEMEAFFKQCPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENAILKAENEKLRAENSRYKEALSNATCPNCGGPAALGEMSFDEQHLRIENARLKQEIDRISGIAEKYVGKPVTSSHNSNHMAPHSRSLDLGVGSYGGGSQSSAGGMVGEMYGGSELLRPFPVPCDSDKPRIVELAVAAMEELTRLAQVGDPLWVQSNQHCTEILNEDEYLRTFRVIGPKALGLRSESSRESAVIIMNHTKLVEILMDVNQWSTMFCGIVSRALTLEVLSTGVAGNYNGALQVMSAEFQVASPLVPSRENYFVRYCKEHPDGRWTVVDVSLENESRSRRSSRRRPSGCLIEELPNGYSKVTWIEHVEVDDRGVHSLYKPLVKCGLAFGAKRWMATLERQCERVASYIGGGAGELCGTSAEGRRSMLKLAERMVMSFCTGVGASTAHAWTTLSSDMDDVRVMTRKSMDDPGRPPGIVLCAATSFSLPVPPNTLFHFLRDQNSRSQWDILSNRGLVQEITHIASSANVLSLLRVNSVNSSQSNMLILQESCTDCSGSYVVYAPVDMAAMNIILSGGDPDYLALLPSGFAILPDGLAASSGGSLLTVAFQILVDSAPTAKLSLGSVATVNTLIKCTVERIKAAVISDTTSFHNLAS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01672 728 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 60 716 IPR042160 -
Arst5g01672 728 ProSitePatterns 'Homeobox' domain signature. 96 119 IPR017970 GO:0000981|GO:0006355
Arst5g01672 728 CDD homeodomain 64 122 IPR001356 GO:0003677
Arst5g01672 728 SUPERFAMILY Bet v1-like 495 713 - -
Arst5g01672 728 SMART START_1 259 477 IPR002913 GO:0008289
Arst5g01672 728 SUPERFAMILY Homeodomain-like 48 121 IPR009057 -
Arst5g01672 728 MobiDBLite consensus disorder prediction 49 72 - -
Arst5g01672 728 FunFam Homeobox-leucine zipper protein GLABRA 2 259 476 - -
Arst5g01672 728 ProSiteProfiles START domain profile. 250 480 IPR002913 GO:0008289
Arst5g01672 728 Pfam Homeodomain 64 119 IPR001356 GO:0003677
Arst5g01672 728 ProSiteProfiles 'Homeobox' domain profile. 61 121 IPR001356 GO:0003677
Arst5g01672 728 SMART HOX_1 63 125 IPR001356 GO:0003677
Arst5g01672 728 Pfam START domain 260 477 IPR002913 GO:0008289
Arst5g01672 728 Gene3D - 315 477 IPR023393 -
Arst5g01672 728 Gene3D - 50 137 - -
Arst5g01672 728 Coils Coil 115 150 - -
Arst5g01672 728 SUPERFAMILY Bet v1-like 251 479 - -
Arst5g01672 728 FunFam Homeobox-leucine zipper protein HDG1 51 137 - -
Arst5g01672 728 CDD START_ArGLABRA2_like 254 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01672 Arst-Chr5 19542033 19545598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01672 1 719 Homeobox Transcription Factor Family AT4G21750 70.327 0.0 1060
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst5g01672 START 1.6e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01672 K09338 - gmx:100815499 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01672 5 19542033 19545598 Arst5g01672 5 19542033 19545598 ECH
Arst9g03355 9 110804465 110808041 Arst5g01672 5 19542033 19545598 ECH
Arst5g01672 5 19542033 19545598 Arst9g03355 9 110804465 110808041 PCT