Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01650 ATGGTGGAAGTTGCAAAGAATAATAAGAGAGGACACAATAATAGTAGTAAGCAAACTGTTCATAGGAAATCCATTGAGACATTTGGTCAAAGAACGTTACAGTACAGAGGTGTCACAAGGCATAGATGGACCGGCAGATATGAAGCACATTTGTGGGATAATAGTTGCAAAAAAGAAGGGCAAACTAGAAAAGGAAGACAAGGTGGCTATCATATGGAAGAAAAAGCTGCAAGAGCTTATGATCTTACAACCCTTAAGTATTGGGGACATTCAATACACATAAACTTTCCGAACTTGTTATGTTGGTTGTGCAATTGGGAATGTGATAAGGATACTGTTAGAGAGGGCAAGCATATTTTTGGTGTTGCTCACATTTTTGCATCATTCAATGACACTTTTATTGTGAGTAAATTATGTTCGTATTTTCTCCTTGTTCTTATTTTATTTGAATTTGCTGAATCGATGGTTTTGGTCGGGTGA 480 0.3688 MVEVAKNNKRGHNNSSKQTVHRKSIETFGQRTLQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYHMEEKAARAYDLTTLKYWGHSIHINFPNLLCWLCNWECDKDTVREGKHIFGVAHIFASFNDTFIVSKLCSYFLLVLILFEFAESMVLVG 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01650 159 FunFam AP2-like ethylene-responsive transcription factor ANT 33 99 - -
Arst5g01650 159 SUPERFAMILY DNA-binding domain 34 98 IPR016177 GO:0003677
Arst5g01650 159 ProSiteProfiles AP2/ERF domain profile. 34 97 IPR001471 GO:0003700|GO:0006355
Arst5g01650 159 CDD AP2 34 99 IPR001471 GO:0003700|GO:0006355
Arst5g01650 159 MobiDBLite consensus disorder prediction 1 22 - -
Arst5g01650 159 SMART rav1_2 34 103 IPR001471 GO:0003700|GO:0006355
Arst5g01650 159 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10 97 - -
Arst5g01650 159 MobiDBLite consensus disorder prediction 8 22 - -
Arst5g01650 159 Gene3D AP2/ERF domain 33 98 IPR036955 GO:0003700|GO:0006355
Arst5g01650 159 Pfam AP2 domain 34 90 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01650 Arst-Chr5 18900381 18902026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01650 17 107 AP2-EREBP Transcription Factor Family AT1G72570 71.277 2.09e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst5g01650 AP2 1.2e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01650 K09285 - psom:113356718 160.229