Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01647 ATGGAGCTTCAAGGTCCCTCAGATCAGTGCCATCCCGAGAGGAAAGGCCAGAAGAGGAAGCTCGAGGACGAGTTCGAAGAAGACCACCACCAGATCTCCACTCCTCCTACCGGCGACGCCCGCGACGCCATCCTTGCCGACGTCCAGGAGCAGGTTTCCATCCTCAACTCTACTTTCTCATGGAAGGAGTCAGATCGAGCCGCCGCCAAGCGCGCTACTCACGCGCTCGCCGATCTTGCCAAAAACGAGGAAGTGGTAAACGTGATTGTCGAAGGAGGAGCTATTCCGGCTTTGGTTCAGCACCTCCAAGCTCCCCTCGTGACGGAAGAAGACCTCGTTCAGAAGCTGTTGCCGTTTGAGCATGAGGTCGAGAAAGGGAGTGCTTTTGCACTTGGACTTCTTGCCGTCAAGCCTGAACATCAACAGCTCATTGTTGACAATGGTGCCTTAAAACACCTTGTTGATCTACTGAAGAGGCATAAGAATGGTTTAACATCTCGTGCCATTAATAGTCTCATTCGTAGGGCTGCAGACGCTATCACTAATCTTGCTCATGAGAACAGCTGCATTAAAACCCGAGTCAGGATGGAAGGTGGAATTCCGCCTCTTGTTCATTTGCTTGAATTTGCAGATACAAAGGTGCAGAGAGCAGCTGCTGGTGCATTGCGAACCCTTGCTTTTAAAAATGATGAAAATAAAAATCAGATTGTTGAATGCAATGCTCTACCAACTCTGATTCTAATGCTTCGTGCTGAAGATGCAGCTATTCATTATGAAGCGGTTGGTGTGATTGGAAATCTGGTCCATTCCTCCCCCAATATCAAGAAAGAAGTTCTTCTTGCTGGGGCTTTGCAACCTGTTATTGGATTGCTTAGTTCTTGTTGCTCCGAGAGTCAGAGGGAAGCTGCCTTGTTGCTTGGACAGTTTGCTGCAACTGATTCAGATTGCAAGGTTCACATTGTACAGAGGGGTGCTGTTCGACCTCTGATAGAGATGCTCCATTCCCCTGATGTGCAGCTCAGAGAAATGTCTGCTTTTGCATTGGGGAGATTGGCCCAGGACACACATAACCAAGCTGGTATTGCTCACAACGGTGGCTTAGTCCCTTTGCTGAAGCTCCTTGATTCGAAGAATGGGTCTTTGCAACATAATGCAGCCTTTGCTCTTTATGGCCTTGCAGATAATGAGGATAATGTGTCAGATTTTATTAGGGTAGGCGGAATTCAGAGATTGCAGGATGGAGAATTCATTGTTCAAGCAACTAAAGATTGTGTTGCAAAGACATTGAAAAGATTGGAAGAGAAGATACATGGCCGTGTGTTGAACCATTTGCTATATCTGATGCGAGTTTCAGAGAAGGCCTTCCAGAGAAGAGTGGCTTTGGCTCTTGCTCATCTTTGTGCAGCAGAGGATCAGAAAAAAATATTTATCGATCACCATGGTCTTGAGTTGCTTATTGGGCTGCTTGGTTCATCCAGCCCTAAGCAGCAACTAGAGGGGGCTGTTGCTTTGTTTAAGGTGGCTAACAAAGCTATGACTCTGTCTCCTGTCGATGCCGCTCCTCCTTCTCCAACACCCCAGGTCTATTTAGGAGAGCAATATGTCAACAATTCTACCTTGTCCGATGTAACGTTTTTGGTTGAAGGCAAACGGTTTTTTGCTCACAGAATCTGCCTGCTTGCATCTTCAGATGCATTTCGTGCAATGTTTGATGGTGGTTACAGGGAGAAGGATGCAAGAGACATTGAGATTCCAAATATTAGATGGGAGGTCTTTGAACTGATGATGAGATTTATATATACTGGGTCAGTTGATGTCACTCTTGATATTGCCCAAGATCTACTTCGAGCGGCTGATCAGTATCTTTTAGAGGGACTTAAGAGACATTGTGAATACACCATTGCACAGGATATATCACTAGAGAACGTGTCAAGTATGTACGAACTTTCAGAAGCTTTTAATGCTATATCATTAAGGCACGCATGCATCCTTTTTATCCTGGAGCAATTTGATAAACTGAGTGCAAGGCCAGGGTATCTACCTAACTCCTTCCAATCCTTTGCTCTCTTTTTTTCCCCCCCTAGACACACACTTCTGATTCAGCGGATAACTCCAGAGATCCGGAATTACTTTGTTAAAGCTCTTACCAAGGCCAATTCCAACACCCAGCTGTAG 2175 0.4598 MELQGPSDQCHPERKGQKRKLEDEFEEDHHQISTPPTGDARDAILADVQEQVSILNSTFSWKESDRAAAKRATHALADLAKNEEVVNVIVEGGAIPALVQHLQAPLVTEEDLVQKLLPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALKHLVDLLKRHKNGLTSRAINSLIRRAADAITNLAHENSCIKTRVRMEGGIPPLVHLLEFADTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRAEDAAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLHSPDVQLREMSAFALGRLAQDTHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGIQRLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVSEKAFQRRVALALAHLCAAEDQKKIFIDHHGLELLIGLLGSSSPKQQLEGAVALFKVANKAMTLSPVDAAPPSPTPQVYLGEQYVNNSTLSDVTFLVEGKRFFAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRHCEYTIAQDISLENVSSMYELSEAFNAISLRHACILFILEQFDKLSARPGYLPNSFQSFALFFSPPRHTLLIQRITPEIRNYFVKALTKANSNTQL 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01647 724 SMART arm_5 229 269 IPR000225 GO:0005515
Arst5g01647 724 SMART arm_5 354 394 IPR000225 GO:0005515
Arst5g01647 724 SMART arm_5 82 136 IPR000225 GO:0005515
Arst5g01647 724 SMART arm_5 271 311 IPR000225 GO:0005515
Arst5g01647 724 SMART arm_5 137 185 IPR000225 GO:0005515
Arst5g01647 724 SMART arm_5 186 227 IPR000225 GO:0005515
Arst5g01647 724 SMART arm_5 469 509 IPR000225 GO:0005515
Arst5g01647 724 SMART arm_5 313 353 IPR000225 GO:0005515
Arst5g01647 724 CDD BTB_POZ_ARIA_plant 528 643 - -
Arst5g01647 724 Gene3D - 37 168 IPR011989 -
Arst5g01647 724 ProSiteProfiles BTB domain profile. 541 608 IPR000210 GO:0005515
Arst5g01647 724 Pfam BTB/POZ domain 534 636 IPR000210 GO:0005515
Arst5g01647 724 FunFam Armadillo/beta-catenin repeat family protein 532 676 - -
Arst5g01647 724 MobiDBLite consensus disorder prediction 1 39 - -
Arst5g01647 724 Gene3D - 169 275 IPR011989 -
Arst5g01647 724 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 148 188 IPR000225 GO:0005515
Arst5g01647 724 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 198 233 IPR000225 GO:0005515
Arst5g01647 724 Gene3D Potassium Channel Kv1.1; Chain A 522 667 IPR011333 -
Arst5g01647 724 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 324 366 IPR000225 GO:0005515
Arst5g01647 724 SUPERFAMILY ARM repeat 59 412 IPR016024 -
Arst5g01647 724 SUPERFAMILY POZ domain 532 635 IPR011333 -
Arst5g01647 724 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 93 149 IPR000225 GO:0005515
Arst5g01647 724 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 240 282 IPR000225 GO:0005515
Arst5g01647 724 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 7 722 IPR044282 -
Arst5g01647 724 MobiDBLite consensus disorder prediction 7 35 - -
Arst5g01647 724 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 7 722 IPR044282 -
Arst5g01647 724 Pfam Armadillo/beta-catenin-like repeat 313 352 IPR000225 GO:0005515
Arst5g01647 724 Pfam Armadillo/beta-catenin-like repeat 194 226 IPR000225 GO:0005515
Arst5g01647 724 Pfam Armadillo/beta-catenin-like repeat 229 268 IPR000225 GO:0005515
Arst5g01647 724 Gene3D - 276 515 IPR011989 -
Arst5g01647 724 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 365 407 IPR000225 GO:0005515
Arst5g01647 724 SUPERFAMILY ARM repeat 439 609 IPR016024 -
Arst5g01647 724 SMART BTB_4 541 638 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01647 Arst-Chr5 18798692 18805609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01647 297 411 U-box Gene Family AT3G46510 30.769 2.36e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Arst5g01647 BTB 6.2e-26 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01647 - - gmx:100812456 1214.91