Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01616 ATGGCATCATTAGATCCTGAAAAAGAAGAACCTTATTACCTTGATCTATTAATACATTGGGTTTTCATTGTTGTCATTCTTCTCATATCCCTGAAGCTTAAACCATTAGAGTCACAGAAATTAAATAATCCAAGACTGATGCAAGCTCATGCAGCACTTGAAGCATGGACACATTGCATGACCTCTGACCCAAACAAAATCACTTCCACATGGTCTGGCCCCAATGTGTGCAACTACACCGGCATCTACTGTGCACCAGCACCAGATGACTCCACCATTTTTACAGTGGCTGGAATTGACCTTAAGAATGCAAACATATCTGGTTCATTACCTGAAGATCTTGGCCTCTTAACCGACCTAGACTTCTTCCATATAAACTCCAATAGATTCACCGGTCCACTCCCTGAGAATTTTACCAAACTTGCTTATCTTTATGAGCTTGATATCAGTTTTAACCAATTCTCAGGACCCTTCCCACAAGTTGTTCTTGCCATTCCTTCCCTGAGATACTTGGATATCAGGTTCAACAACTTTGCCGGCGACGTTCCTTCGAGCCTTTTCGACCTCAAACNNNNNNNNAAATTCCAGTTCTCCTTACCACAAAACTTTGGGAACTCACCAGTTTCTGTTATGATATTATCAAACAATGATATAAAGGGTAGTATTCCATCAAGTGTGGCCAAAATGAAGGATACCCTTAATGAGATTATAATATCGAATACGGGACTAACGGGTCCATTACCCCAAGAAATAGGGTACTTAGACAAAGTGACAGTGTTTGATGTGAGCTTCAACAGATTGGAGGGAGAACTACCTGGAACCATGCAAGGAATGAAGAGCTTGGAACAGTTAGTTTTAAAGCATAACAATTTCTCAGGTGTGGTTCCTACCAGCATTTGTATGTTGCCTAAGTTGAAGCACTTCGATTGTTCAAATAATTACTTCCATGGTCCATTCCCAAAATGTCCCTTCATTAAACGAAAGCACAATCCGGGAAAATTCATGGGTTTCTAG 1014 0.4034 MASLDPEKEEPYYLDLLIHWVFIVVILLISLKLKPLESQKLNNPRLMQAHAALEAWTHCMTSDPNKITSTWSGPNVCNYTGIYCAPAPDDSTIFTVAGIDLKNANISGSLPEDLGLLTDLDFFHINSNRFTGPLPENFTKLAYLYELDISFNQFSGPFPQVVLAIPSLRYLDIRFNNFAGDVPSSLFDLKXXXKFQFSLPQNFGNSPVSVMILSNNDIKGSIPSSVAKMKDTLNEIIISNTGLTGPLPQEIGYLDKVTVFDVSFNRLEGELPGTMQGMKSLEQLVLKHNNFSGVVPTSICMLPKLKHFDCSNNYFHGPFPKCPFIKRKHNPGKFMGF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01616 337 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 38 326 - -
Arst5g01616 337 Pfam Leucine rich repeat 257 314 IPR001611 GO:0005515
Arst5g01616 337 Gene3D Ribonuclease Inhibitor 47 205 IPR032675 -
Arst5g01616 337 SUPERFAMILY L domain-like 60 320 - -
Arst5g01616 337 FunFam Leucine-rich repeat receptor protein kinase EMS1 203 294 - -
Arst5g01616 337 Gene3D Ribonuclease Inhibitor 206 332 IPR032675 -
Arst5g01616 337 FunFam Leucine-rich repeat extensin-like protein 1 50 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01616 Arst-Chr5 18412026 18415084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01616 41 322 Leucine-rich Repeat extension Gene Families AT3G22800 58.824 1.28e-113 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01616 - - adu:107488511 670.233