Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01614 ATGGCGTCAAGATTTTGGACCCAGGGTGCGAGCGATTCTGAGGAAGAAAGCAGTGACTTTGATGAGGTTGAAGAGACGACGGCTGGTGAGGTCGATCCCGCTGCCAATAGGTATTTGACAACTGAGGTGAGTGACAGTGATGACTCGGATAGCCAACGGCGGGTTGTCCGGTCGGCAAAGGATAAGCGATTCGAGGAGATGGCTTCTACCGTTGATCAGATGAAGAATGCCATGAAGATCAATGATTGGGTGAGCTTGCAGGAGAGCTTTGATAAGATCAACAAGCAGCTTGAGAAGGTCATGCGTGTTACCGAGTCTGAGAAGGTCCCCAGTCTCTACATCAAGGCCCTGGTGATGTTGGAAGACTTTTTGGCTCAGGCTTTGGCCAATAAGGATGCCAAAAAGAAGATGAGTAGTAGCAATGCTAAGGCTTTGAACTCGATGAAGCAGAAGTTGAAGAAGAACAATAAGCAATATGAGGAACTGATTAACAAATGCAGGGAGAGCCCTGAGAGTGAGGAGGAGAAAGAAGAGGAGGAATCCGAGGATGAGTATGAGAGTGATGGTGAGATTATCGAGCCGGATCAGCTTAAGGGAAGAGATGACCTGAAATCAGATTCTGAAGTCTCTCACTATGAAGATGAAAAGGTCGATGCTGGTGAGGGACCCTGGGACCAAAAACTTAGCAAGAGAGACAGACTTATGGATAGGCAATTCATGAAAGACCCTAGTGAGATCACTTGGGACACCGTCAACAAGAAATTCAAGGAGATTGTGGCAGCAAGGGGCAGGAAGGGAACTGGAAGGTTTGAGCAGGTTGAGCAGCTTACTTTCCTTACAAAAGTTGCTAAAACACCTGCACAGAAGTTGGAGATCCTTTTTAGTGTGGTATCTGCCCAGTTTGATGTTAACCCTGGCCTAAGTGGGCACATGCCCATTAATGTTTGGAAAAAATGTGTGCATAACTTGCTGGTCATTCTTGACATTTTAGTGCAATACCCTAACATAGTTGTTGATGATGCTGTGGAGCCAGATGAGAATGAAACACAGAAGGGCCCTGACCATAATGGACCAATTCGCATTTGGGGAAACTTGGTCACCTTCTTGGAAAGAATAGATGCCGAGTTTTTCAAGAGTTTGCAGTGCATAGATCCACATACTCGTGAGTATGTTGAGAGACTCAGGGATGAGCCAATGTTTCTTGTTCTTGCTCAGAATGTCCAGGAATACCTTGAAAGGGTTGGAGATTTCAAAGCTGCTTCTAAGGTGGCCTTGAGGAGGGTTGAACTCGTTTACTACAAACCACAGGAGGTTTATGTTGCAATGAAAAAATTGGCGGAGTTGGCTGAAGATGGGGTTAATGAAGGGGCTGGTGAGGAGAAAGGGTTTGAGGATACAAGAATTCCCACTCCATTTATTGCTACTCCTGAGCTTGTGCCCCGCAAACCTACCTTCCCTGAGAACAGCAGGACTCTAATGGACATATTGGTTACCCTGATATACAAGTATGGTGATGAGCGCACTAAAGCACGGGCAATGCTTTGTGACATATACCACCATGCTCTTCTTGACGAGTTCTCAATATCCCGTGATCTGCTGCTCATGAGCCACTTGCAAGACAGCGTTCAGCATATGGACATATCAACACAGATACTGTTTAACAGGGCTATGGCACAGTTGGGTCTATGTGCTTTTAGGGTTGGGTTGATTTCCGAAGCACATGGCTGTTTATCTGAACTTTATTCTGGTGGAAGGGTGAAGGAGTTGCTTGCACAAGGTGTGTCACAGAGTCGTTATCATGAAAAGACCCCAGAACAGGAAAGGTTGGAAAGAAGGCGTCAGATGCCATATCATATGCACATAAATCTTGAGCTCCTGGAGGCAGTGCATCTTACAACCGCTATGCTTCTTGAAGTTCCCAATATAGCAGCCAATGTTCATGATGCAAAGCGCAAAGTCATTAGTAAGAACTTCCGCCGCTTACTTGAGGTGAGTGACAAGCAAACGTTTACTGGTCCACCTGAAAATGTCAGAGACCATGTTATGGCTGCCACAAGGGCTCTTGCCAAAGGAGACTTCAACAAGGCTTATGACATCATTGTGTCTCTTGACGTTTGGAAGTTTGTTAGAAACAGAGATACTGTACTTGCAATGCTGAAAGATAAGATCAAGGAGGAGGCATTGAGGACATATCTCTTTACGTTCTCATCATCTTATGATTCTTTGAGCCTTGATCAACTCACCAAAATTTTTGATCTCTCTGTTGCTCATACTCATAACATTGTTAGTAGGATGATGATCAATGAAGAGCTTCATGCAAGCTGGGACCAGCCAACTGGCTGCATTGTTTTCCAGGATGTGGAGCACTCTAGGTTGCAGGCATTGGCATTCCAGTTAACAGAGAAGTTATCCATCCTTGCCGAGAGTAATGAAAGAGCAATGGAGGCAACCATAGGTGGTGGTGGATTGGATCTTCCTATGAGGCGTAGGGATGGCCAGGATTATGCTGCTGCTGCTGCTGGTGGAACCAACACTGGGAGTGGCAGGTGGCAGGACTTGGGTTCTCAGACAAGACAAGGTGGTGGGCGATATGGTAGTGGAGGTGGAAGGCCGTTGGCTTTAGGCCAAGCAGGTGGGGTTGGATATTCAAGGGACCGAGCAGGACGTGGATCTGGTCGGTATCAAGATTCTGCGTATGGAGGTTCAGGCAGGACTCAAGGTGGTATCTCATTGAGGGGATCGCATGGTGATGTATCATCGCGCATGGTTAGCCTCAAGGGTGTGCGTGCTTAG 2793 0.4658 MASRFWTQGASDSEEESSDFDEVEETTAGEVDPAANRYLTTEVSDSDDSDSQRRVVRSAKDKRFEEMASTVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKVPSLYIKALVMLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEELINKCRESPESEEEKEEEESEDEYESDGEIIEPDQLKGRDDLKSDSEVSHYEDEKVDAGEGPWDQKLSKRDRLMDRQFMKDPSEITWDTVNKKFKEIVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLSGHMPINVWKKCVHNLLVILDILVQYPNIVVDDAVEPDENETQKGPDHNGPIRIWGNLVTFLERIDAEFFKSLQCIDPHTREYVERLRDEPMFLVLAQNVQEYLERVGDFKAASKVALRRVELVYYKPQEVYVAMKKLAELAEDGVNEGAGEEKGFEDTRIPTPFIATPELVPRKPTFPENSRTLMDILVTLIYKYGDERTKARAMLCDIYHHALLDEFSISRDLLLMSHLQDSVQHMDISTQILFNRAMAQLGLCAFRVGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLTTAMLLEVPNIAANVHDAKRKVISKNFRRLLEVSDKQTFTGPPENVRDHVMAATRALAKGDFNKAYDIIVSLDVWKFVRNRDTVLAMLKDKIKEEALRTYLFTFSSSYDSLSLDQLTKIFDLSVAHTHNIVSRMMINEELHASWDQPTGCIVFQDVEHSRLQALAFQLTEKLSILAESNERAMEATIGGGGLDLPMRRRDGQDYAAAAAGGTNTGSGRWQDLGSQTRQGGGRYGSGGGRPLALGQAGGVGYSRDRAGRGSGRYQDSAYGGSGRTQGGISLRGSHGDVSSRMVSLKGVRA 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01614 930 MobiDBLite consensus disorder prediction 844 862 - -
Arst5g01614 930 ProSiteProfiles PCI domain profile. 617 789 IPR000717 -
Arst5g01614 930 Pfam PCI domain 657 785 IPR000717 -
Arst5g01614 930 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 718 806 IPR000717 -
Arst5g01614 930 MobiDBLite consensus disorder prediction 133 152 - -
Arst5g01614 930 MobiDBLite consensus disorder prediction 1 61 - -
Arst5g01614 930 MobiDBLite consensus disorder prediction 153 172 - -
Arst5g01614 930 MobiDBLite consensus disorder prediction 14 28 - -
Arst5g01614 930 MobiDBLite consensus disorder prediction 132 229 - -
Arst5g01614 930 SUPERFAMILY "Winged helix" DNA-binding domain 713 788 IPR036390 -
Arst5g01614 930 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 925 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Arst5g01614 930 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 925 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Arst5g01614 930 MobiDBLite consensus disorder prediction 173 190 - -
Arst5g01614 930 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 44 649 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Arst5g01614 930 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 2 861 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Arst5g01614 930 MobiDBLite consensus disorder prediction 191 229 - -
Arst5g01614 930 MobiDBLite consensus disorder prediction 838 930 - -
Arst5g01614 930 Coils Coil 142 169 - -
Arst5g01614 930 MobiDBLite consensus disorder prediction 898 913 - -
Arst5g01614 930 MobiDBLite consensus disorder prediction 43 61 - -
Arst5g01614 930 Gene3D - 725 793 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01614 Arst-Chr5 18340112 18343948 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01614 1 930 Eukaryotic Initiation Factors Gene Family AT3G56150 67.759 0.0 1186