Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01609 ATGGAATATCTGCAGTTGATGATTCGATTGCTCTACCTGGAGTCGGGTGAATTTGATCCGAAGGGGCAAGAATTAGAGCATTGGGATAATTTAATCTCTGGAGATACTGACTTCTTCGTTTTCAATTCCCCAAATGAAGCAGCGGCTTTTAAGGATATAATGCAGAAGCCAGATTCCCATCTTATGCCTCTGGTACCGGAATCTTCCATATATAATGGTTTGAGCGATGATAGCAAAGCTAAAATAGAAGACTATCGTCCCGAGCCTTTAGCAGTCACAGACCAAATGCAGGACAAACATTACGTTGCCATGACTAGCAATACAAAGGAGAAAGCAGATGCTGAGTTTGCTTCTGTGATGAACCATAGTAAGCGGAGGCGATGTCTAGACTTTGAGACGGCCAGTGTGCAAAGGAAGAACTCAGATCATAATTTAAAATCCGATTCTCTTGTACATTCTAATGAAAAGCAACTGGTTGCTGCAAAATGCAATAGCAGTTCACAGCAATGCACTATGCCTGCAGTTGGCTTAGATTTGAATGCACTTGCAGCCTTGAAGGGAGACAAAAAAGTCATAAGTAATGACAATTGGCCTTGTGAAATTCATGTTAATCTTCCTAGTTGCACTTCAGTGCAAATCTATACCAGTCATGAACATCATGATCCATTGGCAGTGGAGGTGGATTCATCAGACATTGGGCCTCAGCCAGTTGAGGATAGTTCCCATGCATCAGATTTCACTGTTGATGAAGATGTCAATCAGAATAGTCCCCAAAAGAAAACACATGGAGACTGCAAGCGTTGTAACTGTAAAAAGTCAAAGTGCTTGAAGCTATATTGTGAGTGCTTTGCTGCTCGTACCTACTGCACTGGCAACTGCTCATGTAAGAATTGCCACAACAAACTTGATCATAAAGACGAAGTCCTTCAAGCTCGCAAGCAGATTGAGTCTCGCAACCCTCTGGCTTTTACTCCTAAAGTCATTCCTGAACCTGAAATTGGGAATGACCCAAATAAAACTCCAGCACCATCACGACACAAGAGAGGATGCAACTGCAAGAAATCATCCTGCCAAAAGAAATACTGTGAATGCTTTCAGGCTGGTGTTGGATGTTCCATAAACTGTAGATGCGACACGTGTAAGAACACGTTTGGTAGAAAGGACGGTGAGTTGTCCCTTCTTTTACAAATTAAATACAAATTAAATACCTGTCAGAATCTAACTGTTTTATTGTTTCGATTTTAA 1245 0.4145 MEYLQLMIRLLYLESGEFDPKGQELEHWDNLISGDTDFFVFNSPNEAAAFKDIMQKPDSHLMPLVPESSIYNGLSDDSKAKIEDYRPEPLAVTDQMQDKHYVAMTSNTKEKADAEFASVMNHSKRRRCLDFETASVQRKNSDHNLKSDSLVHSNEKQLVAAKCNSSSQQCTMPAVGLDLNALAALKGDKKVISNDNWPCEIHVNLPSCTSVQIYTSHEHHDPLAVEVDSSDIGPQPVEDSSHASDFTVDEDVNQNSPQKKTHGDCKRCNCKKSKCLKLYCECFAARTYCTGNCSCKNCHNKLDHKDEVLQARKQIESRNPLAFTPKVIPEPEIGNDPNKTPAPSRHKRGCNCKKSSCQKKYCECFQAGVGCSINCRCDTCKNTFGRKDGELSLLLQIKYKLNTCQNLTVLLFRF 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01609 414 MobiDBLite consensus disorder prediction 229 255 - -
Arst5g01609 414 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 27 392 IPR044522 GO:0003700
Arst5g01609 414 SMART CXC_2 263 304 IPR033467 -
Arst5g01609 414 SMART CXC_2 345 386 IPR033467 -
Arst5g01609 414 MobiDBLite consensus disorder prediction 234 254 - -
Arst5g01609 414 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 266 301 IPR005172 -
Arst5g01609 414 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 347 383 IPR005172 -
Arst5g01609 414 ProSiteProfiles CRC domain profile. 264 385 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01609 Arst-Chr5 18260201 18262006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01609 350 400 CPP Transcription Factor Family AT3G22760 49.020 4.79e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Arst5g01609 TCR 1.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01609 - - adu:107488515 870.152