Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01593 ATGAGTACTGTTGGATACAGGTCAGATGATGAATGCTCTTATGTTGGAGGAAAGGGAGAAATCGGGTTTCTAGATTTTGAGGAAGAGAAATCTGTTTGTAGTTACGCTGCTATTGATGATGGCGATCCGGTTATCATATCCATCCCATTTGCATTTGTGGATGGGAAGCCTCAATCAGTGTTTGTTGGAGATACTGCTGTGGATTTAATAACCATCAATAATACCACCAAAGAGCCTGTGCAGTTGTGGACTGTTCATATTTTTGCCTCAAATCCTCAGAACACTTTCACTCTTTCTCTGATGGAACCTCCATCAGCAAATTCAAATTCAAATGGAGATTCAGATGAGGGCTTTCTCGAATCATTTGATTTGGAGGATAGAATGCTTCAGCCTGGTGAGATTTTAAAAGTATGGTTGTCTTGCAAGACAAAAGAAATGGGCATGTACCAATCAATTGTGCATTTTGATGTTGGAGAAGAAAGAATAGAAAGGGTGGTTTTTGTCTTAGTTGAAGACAAGATTTCGAAATCGTTGGCTTCTAAGAGGCCTTATTCTCGACAAAGAAGAAAAGACAAATTTGCAGTAGATAATTTCGTCGCAGGCTCACGTCCTGCAGGGAAAACAAATCGGGCCTACATTAATAGGCTTCCAAAATATGATATTCCCGGGGATATTAGACACTTGCTTGAGAGCAATCAGATCCCTGAAGCTGTTGAAGGTGGTCTAACAAGAAAGAATTATGCTTCTTTTTTCAAAACATTGGTGATAATGGAAGAAATACAATTAGAGGAAGACATGAAGACTTATGACATGGAATGCGTAACAATGAGGAAGAGACCCAATCAATTTTTGTCCATGTTGGTTCCTGGGCTTGCTGAGAGAAGACCATCACTGGTTCATGGGGATTTCATCTTTGCCAAACTAGCATCTGAAAATGATAAGAACACTGGACGCCCTTATCAGGGATTTATCCATCGTGTTGAAGCTGATGAGATCTTTTTGAAGTTTGATAATGAATTTCACCTGCGCCATAGAGATGGAAATCTTTATGATGTTCACTTCACCTACAATAGGATCAATATGAGAAGGTTGTATCAAGCAGTTGAGGCAGCCAGTGGCTTAGGATCCGAGTTCCTTTTTCCATCTACTTTAGCCAGGAAGAGGTTCATTGAAACCACTGATCTGATTCCCATATCTGGTGCTTTTAATGATGAGCAGATTTCTTCAATCAAAAGTATTGTTGGTTGCAAAGGGGCGCCACCATATCTGATTTATGGGCCTCCAGGTACGGGAAAGACTAAGACAATAGTAGAAGCAGTTCTCCAGCTCTACAAACATAATAAGGATGCCCGTATTCTTGTCTGTGCACCATCAAATAGTGCAGCAGACCACATATTAGAGAAACTGCTTGCTGAGAAGTCTGTTGAATTTCAAGAAAATGAAATATTCAGGCTCAATGCTTCTACCAGGCCATATGAGGATGTCAAACCTGAAATTATCCGTTTCTGCTTCTTTGATGAGTTGATATTTAAATGCCCGCCAGTCAGTGCCCTCAGGCATTATAGGATTATAATATCAACATATATGAGTGCCTGTCTTCTTTATGCAGAAGATGTTTCACGGGGTCATTTCTCTCACATTTTCTTGGATGAGGCTGGCCAAGCCTCAGAACCTGAAACCATGATCCCTATATCCCATCTCTGCAGAAGGGAAACTGTTGTTGTTCTAGCTGGAGACCCAATGCAGTTGGGTCCAGTAATTTATTCGAAGAAAGCAGATACACATGGATTGGGGACATCATACCTGGCACGACTGTTTCAATGTGAGATGTATGCAACTGGAGATGCAAATTATGCAACGACATTGGTTAATAATTATCGATGCCATCCAGAGATATTACATCTCCCTTCAAAGCTGTTTTATAATGGGGCGTTGATTGCATGCAGAGACAAGACAACCTTCATGGTGAGTCCTGGCTTCCTCCCTAATGAGGAGTTTCCCGTTCTTTTCTTTGGCATCCAAGGATGTGATGAAAGAGAAGGGAATAACCCCTCATGGTTCAACCGAATTGAAGTGAGCAAAGTTGTCGAAGTTGTCAAGAGGCTGACAGCTGGTGGGAATATAATGGAGGAACACATTGGCATAATAGCACCATATAGGCAACAAGTACTCAAAATTAAACAGACTCTTGAAAATCAAGAGATGCCTGATATCAAAGTTGGTAGTGTTGAACAGTTTCAAGGACAAGAGAAGGAAGTTATTATCATATCAACTGTTCGATCAACCATCAAACACAATGAGTTTGACAGAGTCCACTGTCTTGGCTTTTTGAGCAATCATAGAAGGTTTAATGTGGCTGTAACTCGTGCCATATCATTGTTGGTTATCATCGGGAATCCACACATTATCTGCAAGGACAATTATTGGAGCCAAATGCTGTGGCACTGCGTAGACAATAAATCTTATCAGGGTTGTAAACTTCCTGATAGGCCAAAGACTTATGTTGAGGACGCTGGAGACAACAATGTGAAGCCTTATGGAGAGGTCAATGGAGAGGACTCTGTAGAATGGGGTCAAGATTTATCCCAGGTGGAGATTCCCAAACCTGTTACTGATGAGGCTGAATGGTCTGATGGCTGGAGAAGTAGTTGA 2652 0.4118 MSTVGYRSDDECSYVGGKGEIGFLDFEEEKSVCSYAAIDDGDPVIISIPFAFVDGKPQSVFVGDTAVDLITINNTTKEPVQLWTVHIFASNPQNTFTLSLMEPPSANSNSNGDSDEGFLESFDLEDRMLQPGEILKVWLSCKTKEMGMYQSIVHFDVGEERIERVVFVLVEDKISKSLASKRPYSRQRRKDKFAVDNFVAGSRPAGKTNRAYINRLPKYDIPGDIRHLLESNQIPEAVEGGLTRKNYASFFKTLVIMEEIQLEEDMKTYDMECVTMRKRPNQFLSMLVPGLAERRPSLVHGDFIFAKLASENDKNTGRPYQGFIHRVEADEIFLKFDNEFHLRHRDGNLYDVHFTYNRINMRRLYQAVEAASGLGSEFLFPSTLARKRFIETTDLIPISGAFNDEQISSIKSIVGCKGAPPYLIYGPPGTGKTKTIVEAVLQLYKHNKDARILVCAPSNSAADHILEKLLAEKSVEFQENEIFRLNASTRPYEDVKPEIIRFCFFDELIFKCPPVSALRHYRIIISTYMSACLLYAEDVSRGHFSHIFLDEAGQASEPETMIPISHLCRRETVVVLAGDPMQLGPVIYSKKADTHGLGTSYLARLFQCEMYATGDANYATTLVNNYRCHPEILHLPSKLFYNGALIACRDKTTFMVSPGFLPNEEFPVLFFGIQGCDEREGNNPSWFNRIEVSKVVEVVKRLTAGGNIMEEHIGIIAPYRQQVLKIKQTLENQEMPDIKVGSVEQFQGQEKEVIIISTVRSTIKHNEFDRVHCLGFLSNHRRFNVAVTRAISLLVIIGNPHIICKDNYWSQMLWHCVDNKSYQGCKLPDRPKTYVEDAGDNNVKPYGEVNGEDSVEWGQDLSQVEIPKPVTDEAEWSDGWRSS 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01593 883 FunFam Probable RNA helicase SDE3 627 825 - -
Arst5g01593 883 CDD DEXXQc_Helz-like 403 627 IPR026122 GO:0003723|GO:0032574
Arst5g01593 883 PANTHER CANCER/TESTIS ANTIGEN 55 125 384 - -
Arst5g01593 883 Gene3D - 331 613 IPR027417 -
Arst5g01593 883 Pfam AAA domain 517 590 IPR041677 GO:0004386
Arst5g01593 883 Pfam AAA domain 402 497 IPR041677 GO:0004386
Arst5g01593 883 CDD SF1_C_Upf1 628 816 IPR047187 -
Arst5g01593 883 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 402 812 IPR027417 -
Arst5g01593 883 Gene3D - 627 828 IPR027417 -
Arst5g01593 883 Pfam AAA domain 599 800 IPR041679 -
Arst5g01593 883 FunFam Probable RNA helicase SDE3 351 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01593 Arst-Chr5 18071211 18075767 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01593 401 558 Core DNA Replication Machinery Family AT1G08840 29.630 3.65e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01593 K18422 - gmx:100801796 1395.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01593 5 18071211 18075767 Arst5g01593 5 18071211 18075767 ECH