Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01572 ATGCACCCCACGTGTTTGATTTTTGGTCTGGAAGCCTTAAATAGCACTGGTGGAGGCGGTGGAGTTGGAGTTGGTGTTGGTGGTGGTGGTGGTGGTGGTTGTAGTGGTGGTGGGGCAGGGATGATGAGTAGTACTAGCAGGTCGCCATTCACAGTGTCTCAGTGGCAGGAACTGGAGCACCAAGCTCTGATTTACAAGTACATGGTGGCTGGTCTTCCTGTTCCTCCTGATCTTGTTATCCCCATTCAGAAGAGCTTTGACTCTATTTCCCATTCCTTCTTCCACCACCCTGCTCTGAGTTATTGTTCTTTCTATGGGAAGAAGGTGGACCCGGAGCCAGGACGATGCAGGAGAACTGATGGGAAAAAGTGGAGGTGCTCTAAGGAAGCATACCCGGACTCCAAGTACTGTGAGCGACACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAATCTATGACACAGTCATCATCCACTGTGACATCACTGACTGCTACAACTGGTGGCAGCAGTGGAACTGGAAGTTACCAGAACCTTAACACAATTACCTTTGCTAATCCTCAAGGCACTGGTTCTGGAGCTGAACAGACACATTATCATTTGGATTCTATCCCCTATGGGATTCCAAGCAGAGAGTACAGGTATCTTCAGGGAAATAAATCAGAGGGTGGCGAACAGAGTTTCTTTTCCAAAGCTTTAGGAAGCAACAAGGAACTTCGGATCGAAACGCAGCTGGAAAACACTTTGATGCCAACCAGAGTTGCCTCCTTCTCAACATCAAGATCAAACAACAACTCCATTTTGCCGGGTGATTATCTGCAGAATTCATATTTATCCGACGAGCATGCATCGGGTGAATCTGTGAAGCATGAGGGTCAGTCTCTTCGACCTTTCTTTGATGAATGGCCTAGGAGCAGGGATTCATGGTCTGGTCTGGAAGCAACTCAGCTGTCCATGTCCATTCCTATGTCGGCGTCGAACTTCTCTACAGCCAGCTCTCAATCCTCGCATGGCGAGACTAAATAA 1038 0.4855 MHPTCLIFGLEALNSTGGGGGVGVGVGGGGGGGCSGGGAGMMSSTSRSPFTVSQWQELEHQALIYKYMVAGLPVPPDLVIPIQKSFDSISHSFFHHPALSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQSMTQSSSTVTSLTATTGGSSGTGSYQNLNTITFANPQGTGSGAEQTHYHLDSIPYGIPSREYRYLQGNKSEGGEQSFFSKALGSNKELRIETQLENTLMPTRVASFSTSRSNNNSILPGDYLQNSYLSDEHASGESVKHEGQSLRPFFDEWPRSRDSWSGLEATQLSMSIPMSASNFSTASSQSSHGETK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01572 345 MobiDBLite consensus disorder prediction 151 178 - -
Arst5g01572 345 Pfam QLQ 49 83 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst5g01572 345 SMART QLQ_2 48 84 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst5g01572 345 ProSiteProfiles WRC domain profile. 110 154 IPR014977 -
Arst5g01572 345 Pfam WRC 111 153 IPR014977 -
Arst5g01572 345 MobiDBLite consensus disorder prediction 137 178 - -
Arst5g01572 345 PANTHER GROWTH-REGULATING FACTOR 5 41 331 IPR031137 GO:0005634|GO:0006351|GO:0032502
Arst5g01572 345 ProSiteProfiles QLQ domain profile. 49 84 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01572 Arst-Chr5 17907156 17911072 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01572 47 153 GRF Transcription Factor Family AT3G13960 63.964 5.40e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Arst5g01572 WRC 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01572 - - ahf:112749828 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01572 5 17907156 17911072 Arst5g01572 5 17907156 17911072 ECH