Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01561 ATGCCAACAAAAATCATGGGGGATGAAGAAGGTGGTGATTGTTTTGGAGAGAATAATAATAAGAGTAATGAAGAGAATAACAAGTGGCCACCATGGCTGAAACCGCTTCTGAAAACAAGCTTCTTTGTTCAATGCAAAGTCCATGGTGATTCCCACAAGAGTGAATGCAACATGTATTGCTTGGATTGTATGAATGGAGCACTTTGTTCTGCTTGTTTGGCTTCTCACAAAGACCACAGAGCCATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTGTCTGAGATTCAGAAATTCATGGAGATAACAGGAGTTCAGACATACATAATTAACAGTGCAAAGATTGTGTTCCTGAATGAGAGGCCTCAACCAAGGCCTGGCAAAGGTGTTACCAACACTTGCCAGGTCTGTGATCGCAGCCTCCTTGATTCCTTCTCCTTCTGCTCTCTTGGTTGTAAGATAGCTGGAACCTCGAAGAAGTACCAGAAGAAGAAAAAGTTAGATGATGATGATGATTCTGATGGTGAAGAGTCAATGAATGGCAGTGGCAGAAACAGAATCCAGAGCTTCACACCGTCGACACCACCACCAACGGCAGTTACTTACAGGAATGCTAAGAGGAGAAAGGGTATCCCCCATAGAGCTCCAATGGGGGGAGGACTAATAATAGAATACTAA 684 0.4327 MPTKIMGDEEGGDCFGENNNKSNEENNKWPPWLKPLLKTSFFVQCKVHGDSHKSECNMYCLDCMNGALCSACLASHKDHRAIQIRRSSYHDVIRVSEIQKFMEITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFSFCSLGCKIAGTSKKYQKKKKLDDDDDSDGEESMNGSGRNRIQSFTPSTPPPTAVTYRNAKRRKGIPHRAPMGGGLIIEY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01561 227 MobiDBLite consensus disorder prediction 182 202 - -
Arst5g01561 227 Pfam PLATZ transcription factor 85 156 IPR006734 -
Arst5g01561 227 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 23 219 - -
Arst5g01561 227 MobiDBLite consensus disorder prediction 165 227 - -
Arst5g01561 227 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01561 Arst-Chr5 17814753 17816811 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Arst5g01561 PLATZ 1.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01561 - - gmx:100792668 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01126 3 8688952 8691559 Arst5g01561 5 17814753 17816811 ECH
Arst5g01561 5 17814753 17816811 Arst5g01561 5 17814753 17816811 ECH