Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01532 ATGTTGTCAGTAGCTCCTTCTCTTGACAGCACCCAAACCCAACAACAACAGCAGCAGCAAAGGACCGCTGACCCAACCCAACAACCCAATTCTTCTCCCCAAAATGTCCACATCTTCAAGTCTAAATTACCCGATATACCCCTCTCTAACCACCTTCCTCTCCACTCTTTCTGCTTCCAAAGACTCAATGAAATCTCTGACCGTCCATGTCTCATCGTCGGTTCCGCCGGAAAAATCTACACCTACGGCGAAACATACCACGCCTCCCGGAGACTCGCCGCCGGCATGTCCGCCATCGGAATTACCAAGGGCGATGTCATCATGATCCTCCTCCAGAACTCAGCGGAGTTTGTCTTCTCCTTCATCGCCGCCTCCATGATCGGCGCTGTCGCCACCACCGCCAACCCGTTCTACACTCCCGCCGAGATCTTCAAGCAGATCACCGCCTCCAAGGCCAAGCTCGTCATCACGCAGGCAATGTACGTTGACAAGCTCCGAGACAGCGATTCCGCCAAAATCGGAGAGGATTTCAAGGTCGTAACCGTCGACGATCCGCCGGAGAACTGCCTGCACTTCTCAGCGATCTCCGAGGGAAACGAGAACGACCTACCGGAGGTTGAGATCCACCCTGACGACGCGGTGGCGCTGCCGTTCTCCTCCGGAACAACCGGTCTCCCGAAAGGAGTGGTTCTCACGCACAGGAGCTTAACGACGAGCGTGGCTCAACAGGTCGACGGAGAAAACCCTAACCTGTACCTGAAAACGGAGGACGTTCTTCTCTGCGTTCTTCCTCTGTTCCACATATTCTCGCTGAACAGTGTTCTGTTGTGTGCTTTGAGAGCTGGAAGCGCCGTGTTGCTGATGCAGAAGTTCGACATTGGAACGTTGCTGGAGCTCATTCAGAGGTACAGGGTTTCGGTGGCGATGGTGGTGCCACCGCTCGTGCTGGCTCTGGCGAAGAATCCGATGGTGGTGGAGTATGATTTGAGCTCTATAAGGTTGGTGTTGTCCGGAGCGGCGCCGCTCGGCAAGGAGCTCGAAGAGGGTCTCCGGAGCAGGGTGCCTCAAGCTGTTTTGGGACAGGGGTACGGGATGACAGAGGCAGGGCCAGTGCTGTCCATGTGCTTGGGCTTTGCGAAGCAACCATTCCCAACGAAATCAGGTTCATGTGGCACTGTTGTTAGAAATGCTGAGCTTAAGGTCGTCGACCCTGAAACTGGTTGCTCTCTTGGTTATAATCAACCTGGTGAAATTTGCATCCGTGGTCAACAAATCATGAAAGGGTATTTGAACGATGATACAGCAACAGCAACAACTATCGATGTGGATGGCTGGCTGCATACCGGTGATGTTGGTTATGTAGATGATGATGATGAAATCTTCATCGTTGACAGGGTCAAGGAACTCATCAAATTTAAAGGTTTCCAGGTGCCCCCTGCAGAACTTGAAGCCCTTCTTGTAAGTCACCCCTCTATTGCAGACGCAGCTGTTGTCCCGCAAAAGGATGTTGCTGCTGGTGAAGTTCCTGTTGCATTCGTGGTTAGATCTAATGGCTTTGAACTCACTGAAGAGTCTGTAAAGGAATTCATAGCTAAACAGGTAGTGTTTTACAAAAGACTACACAAAGTGTACTTTGTGCATGCAATTCCGAAGTCTCCATCAGGAAAGATATTAAGGAAAGACCTCAGAGCAAAGCTAGAAAACACCACCACCCTTAAGCCCTAG 1725 0.5165 MLSVAPSLDSTQTQQQQQQQRTADPTQQPNSSPQNVHIFKSKLPDIPLSNHLPLHSFCFQRLNEISDRPCLIVGSAGKIYTYGETYHASRRLAAGMSAIGITKGDVIMILLQNSAEFVFSFIAASMIGAVATTANPFYTPAEIFKQITASKAKLVITQAMYVDKLRDSDSAKIGEDFKVVTVDDPPENCLHFSAISEGNENDLPEVEIHPDDAVALPFSSGTTGLPKGVVLTHRSLTTSVAQQVDGENPNLYLKTEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMQKFDIGTLLELIQRYRVSVAMVVPPLVLALAKNPMVVEYDLSSIRLVLSGAAPLGKELEEGLRSRVPQAVLGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVVDPETGCSLGYNQPGEICIRGQQIMKGYLNDDTATATTIDVDGWLHTGDVGYVDDDDEIFIVDRVKELIKFKGFQVPPAELEALLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFELTEESVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLENTTTLKP 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01532 574 Pfam AMP-binding enzyme 65 472 IPR000873 -
Arst5g01532 574 MobiDBLite consensus disorder prediction 1 36 - -
Arst5g01532 574 Gene3D - 467 571 IPR045851 -
Arst5g01532 574 SUPERFAMILY Acetyl-CoA synthetase-like 29 568 - -
Arst5g01532 574 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Arst5g01532 574 CDD 4CL 48 562 - -
Arst5g01532 574 Pfam AMP-binding enzyme C-terminal domain 481 556 IPR025110 -
Arst5g01532 574 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 35 564 - -
Arst5g01532 574 FunFam Long-chain-fatty-acid--CoA ligase FadD 40 467 - -
Arst5g01532 574 FunFam 4-coumarate--CoA ligase 2 468 569 - -
Arst5g01532 574 Gene3D - 30 466 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01532 Arst-Chr5 17323981 17329153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01532 32 479 Monolignol Biosynthesis Gene Families AT1G65060 71.397 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01532 K01904 - gmx:547930 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01532 5 17323981 17329153 Arst5g01532 5 17323981 17329153 ECH