Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01473 ATGGAGGGGACCGAGGAAGTTTCATCTAATTTTCAGGAGAATGTCACTGCAGGGGTGGAAGAGGACCCGATAGAAAATGGGAACTTTGTTGCAGAAACAGAATCCGTTCCGATTGGTGCAAGTCAGTCAGACGATCAAAGAGATGTCATCTTTCTCGACGGAATAGGTTCATTTGGTGTAATTGATTTTGATGCGTTGCGAGATGAGGAGATTATGATGATAGAGTTTGTCGATTTGAAAACTGCTTACGACTTCTATAACGAGTACGGTCGAATTAAGGGGTTTTCCATACGCCGGTCGAAGGTAGGGCGCTGCAAGAAGGCAGGATCTGAGGGCAACATTATATGGCAAATTTTTGTATGCTCGCGACAAGGTGAACGAGATGCAAAGCATGTTCACAGAAATGATAGGAAGATGGATCCTAGACCAGTAACGCGATGCGGGTGTAATGCGCGGATAAAAGTTCATGTTGACTCGAGGAACGAGAGATGGTATGTTGACTTCTTCTCCGATGAACATAACCATGACATGTTGGAGGCAAGGTTTAGGGGAATGATGCAGTCTCACCGGGCAATAAAAACGGGGGATTTACACCAGATTAATACTATGAGAAGCTCTGGCCTTCGAGTTCCGACAATATTTCGGGCTTTTGCAAACCAAAATGGTGGATTCGAGATGGTTGGGTTTCAGGTGAAAGACATCTATAATGCAATTGAGAAGCAAAGAAGAGCTGGAGCAAGCGACACAGATAATGCACTCAAGTATTTACAAATGTTGAAGAGGCGTGACCCCTGTATGTTTTGGAAGTATTCGTTGGATGAACAACGGAGGCTCCATAATATATTTTGGTGTGATGGTGCAAGTCAGTATGATTTCAATGTTTTCGGAGATGTTATGGGGTTTGATGCAACGTACGGGAGGAATAAGTACAAATGTCTCCTTGTGATATTCTCTGGCGTGGATCACCACATGCGCACTGTTGTGTTTGGATGCGCAGTTCTCTCAAAGGAAGGGGAGGAAAGCTATGTGTGGTTGCTTCGGGCATTTCTGGAGGCCATGAAAGGAAAGGCTCCTAAGTCCGTTATTACCGACGGTGATCAAGCCATGAAGAGCGCAATCAAAGCTGTATTTCCAGAAGCACATCATAGATTGTGCAGCTGGCACTTGCTACGCAATGCGACCGCTCGAGTAGGTATTCCACGGTTTATGACCAAGTTTCGTCTTTGTTTAATGGGGGATTTGGAGGTCGATGACTTTGAAGATATATGGAATGATGCAGTTGAAGAATTTGGGTTGCAACAAAATTCATGGGTCAAGGATATGTATGAAAGGAAACATATGTGGTCAAATGCCCACATTAGGGGTAAGTTCTTTGCTGGGCTCAAGACAACATCAAGGTGTGAGGCGCTAAATATGCAGATAGGGAAGTTTATACACAACGGCTACAACTTGAGGGAATTTATTGAGCATTTCCAACAGTATTTAGAGTTCATGCGTTGGAGAGTAGTGGTTGCTGATTACAAATCTGCTTATGGAGAACCGGTTGTGAAAACAAGATTAGAGGAGTTAAAGCGGTTTGCAGCAGCAGTATACATACGAGAGGTCTTTGTCTTATTTCGGGAGGTGTTATTACTAGCTAGCAATGTCAGAGTAGTTTCTTCGAAGAAGACAAGCACGTGTACATTGTTTGAGGTGGCCATGTATTGCCAAGGTAGATCATGGAACGTTTCCTGGGGGGAGATAGATGATGAATTCAGATGCTCTTGCCTGCGCATGAAATCTTTTGGAATCCCCTGTGTCCACATAGTTGGTGTGCTTGTTAGACTTAACATGGTTGTTATTCCAGGTAGTCTTATACTGGGTCGTTGGACAAAGAAGGCAAAACAACCACCGATAAATAACCATGTTTTTAGTGGAGAGATTCCTGATGCAGCCTATATGAGTATGCATGCGGCAATGCTCGATGACTGTAGAGAACTGGTAAAGCTTTCTTGTAGTAACTTTGAGGATTACTTCGAGGTGAAGACCAAAATAGCTAATGAACGAGACGCGCTAAGAGAAAAGATTCAAAAAAGGTTGGCGACCACTGCTGAGGGCGAGGGCGATAATGCGTCCATACACGATCCTCCAAGAGCCAGATATAAAGGGTGTGGTCGTCATGTTGTGACGACTCGTGGGAGGTACCGGCGTGTCCAATGTTGCAGAAAGTGTGGCAAGGCTGGCCATAACGCTCGTAGATGCGCAATCGGGAATGGTGAGGACACCACGCATGAATTAGATGCTTTTGGATCATTGCACAACATGGACGAATCACAAGAAGCCGAGGCTTCACAACAGATGGAGTACGATGATCTGAGCTTCTAA 2364 0.4463 MEGTEEVSSNFQENVTAGVEEDPIENGNFVAETESVPIGASQSDDQRDVIFLDGIGSFGVIDFDALRDEEIMMIEFVDLKTAYDFYNEYGRIKGFSIRRSKVGRCKKAGSEGNIIWQIFVCSRQGERDAKHVHRNDRKMDPRPVTRCGCNARIKVHVDSRNERWYVDFFSDEHNHDMLEARFRGMMQSHRAIKTGDLHQINTMRSSGLRVPTIFRAFANQNGGFEMVGFQVKDIYNAIEKQRRAGASDTDNALKYLQMLKRRDPCMFWKYSLDEQRRLHNIFWCDGASQYDFNVFGDVMGFDATYGRNKYKCLLVIFSGVDHHMRTVVFGCAVLSKEGEESYVWLLRAFLEAMKGKAPKSVITDGDQAMKSAIKAVFPEAHHRLCSWHLLRNATARVGIPRFMTKFRLCLMGDLEVDDFEDIWNDAVEEFGLQQNSWVKDMYERKHMWSNAHIRGKFFAGLKTTSRCEALNMQIGKFIHNGYNLREFIEHFQQYLEFMRWRVVVADYKSAYGEPVVKTRLEELKRFAAAVYIREVFVLFREVLLLASNVRVVSSKKTSTCTLFEVAMYCQGRSWNVSWGEIDDEFRCSCLRMKSFGIPCVHIVGVLVRLNMVVIPGSLILGRWTKKAKQPPINNHVFSGEIPDAAYMSMHAAMLDDCRELVKLSCSNFEDYFEVKTKIANERDALREKIQKRLATTAEGEGDNASIHDPPRARYKGCGRHVVTTRGRYRRVQCCRKCGKAGHNARRCAIGNGEDTTHELDAFGSLHNMDESQEAEASQQMEYDDLSF 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01473 787 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 73 670 IPR031052 GO:0006355
Arst5g01473 787 ProSiteProfiles Zinc finger CCHC-type profile. 734 747 IPR001878 GO:0003676|GO:0008270
Arst5g01473 787 Pfam MULE transposase domain 298 392 IPR018289 -
Arst5g01473 787 MobiDBLite consensus disorder prediction 1 16 - -
Arst5g01473 787 Pfam SWIM zinc finger 586 609 IPR007527 GO:0008270
Arst5g01473 787 ProSiteProfiles Zinc finger SWIM-type profile. 574 610 IPR007527 GO:0008270
Arst5g01473 787 Pfam FAR1 DNA-binding domain 84 178 IPR004330 -
Arst5g01473 787 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01473 Arst-Chr5 16417051 16419517 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst5g01473 FAR1 6.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01473 - - adu:107488338 1607.04