Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01468 ATGGACATGCCTTCTTCAAGTTCCAACCATCACAACCCTACCGGCCCTGCTACTTCTCCCTACAGAGGCGTCCGCAAGAGGAAATGGGGCAAATGGGTCTCCGAAATCCGTGAGCCGGGGACCAAGACTCGGATATGGCTCGGCAGCTTCGAGACACCTGAGATGGCGCCGCGCCCTCTCAGCAACAATGCCGACCACATACGAATGGCCGCGCACGAGGCTGCCCTCAGGCTTAGGACTAATACTGCGGCTGTTGAGTCAGGTGACAATATTTTATCGCCTGGCTCGGCCAACGCAGTGCCGGTCACGGTGAGACTATCCCCAACGCAGATTCAAGCCATCAATGACTCCCCTTTGGACTCACCCAAGTCGTGGATGCAAATGCCGGACACATTCATGATGGATGATTCAATGATGTTTGCAAATAATGGGTATGATCAAACTTTTGATGAGGAAAATGTGCAGTGGAATGATTCCCTTTGGGATCCTTAG 492 0.5285 MDMPSSSSNHHNPTGPATSPYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAXPRPLSNNADHIRMAAHEAALRLRTNTAAVESGDNILSPGSANAVPVTVRLSPTQIQAINDSPLDSPKSWMQMPDTFMMDDSMMFANNGYDQTFDEENVQWNDSLWDP 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01468 164 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 114 - -
Arst5g01468 164 SMART rav1_2 20 90 IPR001471 GO:0003700|GO:0006355
Arst5g01468 164 Gene3D AP2/ERF domain 20 87 IPR036955 GO:0003700|GO:0006355
Arst5g01468 164 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Arst5g01468 164 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Arst5g01468 164 ProSiteProfiles AP2/ERF domain profile. 20 56 IPR001471 GO:0003700|GO:0006355
Arst5g01468 164 Pfam AP2 domain 21 56 IPR001471 GO:0003700|GO:0006355
Arst5g01468 164 MobiDBLite consensus disorder prediction 1 16 - -
Arst5g01468 164 SUPERFAMILY DNA-binding domain 19 57 IPR016177 GO:0003677
Arst5g01468 164 CDD AP2 21 80 IPR001471 GO:0003700|GO:0006355
Arst5g01468 164 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01468 Arst-Chr5 16294870 16295873 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01468 19 164 AP2-EREBP Transcription Factor Family AT1G71450 48.837 1.20e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst5g01468 AP2 1.4e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01468 - - gmx:100801245 229.18