LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst5g01466	ATGGGATTCTGGGGGATTGAAGTTAAGCCCGGGAAGCCATATCCTTATCATGCAGACAACATCCAGGGAAAGCTTCATGTCACTCACGCTACACTAGGCATTGGTTCATCCAATGAGAAAACCATTCTTCAATGCTCTTCTGGACACAAAAGTCCAATTTTCTTGTGTTCATTGCTACCGAATAAGATTGAATCTTGCCCCTTGAATCTCGAGTTTGGTGATGATGACTTAGTGGCTTTCTCCGTCATTGGACCACAAAGCATCCATCTTTCTGGTTATTTTGTCGCAGATGATGGGGATGACCTTAGGGATGACTATGAATATGATTCATTCCCAGAGGATGTTGAGGGAGATACAGAGGATTCATCTGATTATGATACTGAAGGTGAATATGATGATGACTACACAGATGATAGTGATATGGAAATGTACCGATCTTCGCCTGTCCCAAATAGTGGAGTTAGAATTGAGGAAATAGTGGATGATGAAATGCCTGAAAATGAAGAAGATCCAGATCAGAAATTGAAGAAAAAGAAACAGGAAGCTCAGATGAAAGAGAAAGTTAACAAAATGTCTCCAATTAGGGGTGAGACTGGCCATCCTGTTTCGGAAAGTGAAGAAGATGATATGGAAAGTGAAGATGAGGATGGTTTTCCAATTTCTGCTGCTGAGAAAGTTAAATTTGAAGTTAAAGGAAACAATGCACATAAGACAGCTGAGGAGGCTGGCAAAAATGCAGAAGATGTTAATAATTCTCCAAGCTTAAAACGGAAAGTCGAAAGTGCCGATGGAGATGAACCGCAGCAGCAAGACAGGAAAAAGAAGAAGAAAAAGAACAAGTTGAAAGAACCTGGTAAAGGGGAAAGTGCTCAGGCACCTGGCAAAAGCATGATGACTGCTACACCAGATGAAAAACATCCAGAGGAGAAGGAAGTTAAGACTACAGAAGTGCATGATGAAAAACCATCCAATGAGGAGCTTGTTGAGAAGAAAAAGAAAAACAAAAAGAAGAACAAGGCTAAAGAGTCCCATGGAGGAGAAGCAACTCCAAGTCAAATTGATAAACCTGTTGAAAATAAGCTGTCTGCCTCAGAGAAAAAAGGAAAGAAACAAGAGACGGAAGCGAAGCCATCTCAAGTGAGAACCTTTCCAAATGGGTTGGTTATTGAGGAGATATCTATGGGTAAGCCAGATGGCAAAAGAGCAGCTCCTGGAAAGAAGGTCAGTGTTAAATATATTGGCAAGCTGCAGAAAAATGGGAAAATATTTGACTCGAATGTTGGAAGGGCACCCTTTAAATTTCACCTTGGTGTAGGACAAGTCATTAAGGGATGGGATATTGGTGTCAATGGGATGAGGGTTGGGGACAAAAGAAGAATCACAGTTCCACCATCTATGGGATACGGTGACAGACGGGTTGGAAGTATACCACCAAATTCGTGGCTTGTGTTTGATGTTGAGTTAATTAATGTTGATCGCTGA	1482	0.413	MGFWGIEVKPGKPYPYHADNIQGKLHVTHATLGIGSSNEKTILQCSSGHKSPIFLCSLLPNKIESCPLNLEFGDDDLVAFSVIGPQSIHLSGYFVADDGDDLRDDYEYDSFPEDVEGDTEDSSDYDTEGEYDDDYTDDSDMEMYRSSPVPNSGVRIEEIVDDEMPENEEDPDQKLKKKKQEAQMKEKVNKMSPIRGETGHPVSESEEDDMESEDEDGFPISAAEKVKFEVKGNNAHKTAEEAGKNAEDVNNSPSLKRKVESADGDEPQQQDRKKKKKKNKLKEPGKGESAQAPGKSMMTATPDEKHPEEKEVKTTEVHDEKPSNEELVEKKKKNKKKNKAKESHGGEATPSQIDKPVENKLSASEKKGKKQETEAKPSQVRTFPNGLVIEEISMGKPDGKRAAPGKKVSVKYIGKLQKNGKIFDSNVGRAPFKFHLGVGQVIKGWDIGVNGMRVGDKRRITVPPSMGYGDRRVGSIPPNSWLVFDVELINVDR	493

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst5g01466	493	PANTHER	FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA	41	492	-	-
	Arst5g01466	493	SUPERFAMILY	FKBP-like	363	491	-	-
	Arst5g01466	493	MobiDBLite	consensus disorder prediction	104	380	-	-
	Arst5g01466	493	MobiDBLite	consensus disorder prediction	104	139	-	-
	Arst5g01466	493	ProSiteProfiles	FKBP-type peptidyl-prolyl cis-trans isomerase domain profile.	405	492	IPR001179	GO:0003755
	Arst5g01466	493	PIRSF	FK506-bp_FPR3	1	53	IPR023566	GO:0003755
	Arst5g01466	493	PIRSF	FK506-bp_FPR3	226	492	IPR023566	GO:0003755
	Arst5g01466	493	PIRSF	FK506-bp_FPR3	46	200	IPR023566	GO:0003755
	Arst5g01466	493	PIRSF	FK506-bp_FPR3	146	326	IPR023566	GO:0003755
	Arst5g01466	493	MobiDBLite	consensus disorder prediction	301	332	-	-
	Arst5g01466	493	MobiDBLite	consensus disorder prediction	169	193	-	-
	Arst5g01466	493	Pfam	FKBP-type peptidyl-prolyl cis-trans isomerase	400	489	IPR001179	GO:0003755
	Arst5g01466	493	Pfam	Nucleoplasmin-like domain	3	95	IPR041232	-
	Arst5g01466	493	MobiDBLite	consensus disorder prediction	251	272	-	-
	Arst5g01466	493	MobiDBLite	consensus disorder prediction	359	376	-	-
	Arst5g01466	493	Gene3D	-	351	493	IPR046357	GO:0003755
	Arst5g01466	493	MobiDBLite	consensus disorder prediction	229	244	-	-
	Arst5g01466	493	Gene3D	Nucleoplasmin core domain	1	100	-	-
	Arst5g01466	493	FunFam	Peptidyl-prolyl cis-trans isomerase	380	493	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst5g01466	Arst-Chr5	16287067	16290583	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst5g01466	401	490	Calmodulin-binding Proteins	AT5G48570	34.021	1.58e-08	55.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst5g01466	K14826		-	gmx:100792856	587.03