Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01437 ATGGGATCAATGTTTCAAGAAGAAGGGTCATCTTCTGTAACTTCGTCACCCCTTCAATTCTTCTCGATGATGTCACTGTCACCTAGCATAGGATCTCCATACACATGGCTAAGAGAGCTTAAATCAGAGGAAAGGGGATTGGCCTTGATCCATTTGTTGCTGACTTGTGCAAACCATGTGGCTGCTGGTAGTCTTGAGAATGCAAATGTAATGCTTGATCAAATTTCCCAGTTAGCTTCCCCTGATGGCGACACTATGCAACGAATCGCCGCATACTTCAATGAAGCGCTGGCCGATAGGATACTCAAGACATGGCCTGGTCTCCACAGGGCCCTCAATTCCACCAGGATTGTCATGGTTTCAGAAGAAATTCTTGTCCAAAAGCTCTTTCTGGAGCTTTTCCCGTTCTTGAAGGTGTCATATATACTGACAAATCAGGCTATTGTTGAAGCAATGGAAGGAGAGAAAATGGTGCACATAATTGATCTCAATGCTGCCGAACCTGCGCAATGGATTGCTCTCCTCCAAGTTTTTAGCGCACGCCCTGAAGGCCCTCCTCATTTGAGAATTACCGGGGTTCATCACCAAAAAGAGATTCTAGAGCAGATGGCTCACAAGCTTACTGAAGAAGCAGAAAAGTTGGATATCCCCTTCCAATTCCATCCTGTAATCAGCAAATTAGAGAATCTTGATTTTGACAAGCTTCGGGTGAAAACCGGAGAAGCATTAGCAATAAGTTCTATTCTGCAATTGCATTCCCTTTTAGGCCTGGATGATGAGGCCTTGCGAAGAAGATCTCCTCTTTTGTCGAAAAACTCAAACGGAATTCACCTGCAGAAAGCCTTGCTGATGAATCAAAGCACATTAGGTGATTTGCTTGAGAAAGATACACTGAATGGCTACAGTCCAAGTCCTGACTCGGCCTCATCCTCGCCGGTTTCTTTAACAGCTTCAATGACTGCAGAGAGCTTTCTCAATGCCCTATGGGGATTATCACCAAAAGTGATGATTGTGACAGAACAAGACTCTAATCATAATGGTTCAACCCTGATGGAGAGAGTACTAGAAGCTCTGTATTCTTATGCGGCATTGTTCGATTGTTTGGAATCCACTGTCTCTAGGACATCAGTGGAGAGATTAAAGGTGGAGAAGATGCTTTTTGGTGAAGAAATCAAGAATATCATTGCTTGTGAGGGAGCTGAAAGAAGGGAAAGACATGAAAAGCTAGATAAGTGGATCCAGAGACTGGATTTGTCCGGGTTTGGCAATGTGCCGTTGAGCTATTACGGCATGTTGCAGGCGCGGAGATTCCTGCAGAGCTGTGGTTGTGAGGGATACAAGATGAGGGAGGAGAATGGTTGTCTAGTAATTTGCTGGCAGGATAGACCTTTGTTTTCAATATCTGCTTGGAGATCTAGGAAGTGA 1425 0.4449 MGSMFQEEGSSSVTSSPLQFFSMMSLSPSIGSPYTWLRELKSEERGLALIHLLLTCANHVAAGSLENANVMLDQISQLASPDGDTMQRIAAYFNEALADRILKTWPGLHRALNSTRIVMVSEEILVQKLFLELFPFLKVSYILTNQAIVEAMEGEKMVHIIDLNAAEPAQWIALLQVFSARPEGPPHLRITGVHHQKEILEQMAHKLTEEAEKLDIPFQFHPVISKLENLDFDKLRVKTGEALAISSILQLHSLLGLDDEALRRRSPLLSKNSNGIHLQKALLMNQSTLGDLLEKDTLNGYSPSPDSASSSPVSLTASMTAESFLNALWGLSPKVMIVTEQDSNHNGSTLMERVLEALYSYAALFDCLESTVSRTSVERLKVEKMLFGEEIKNIIACEGAERRERHEKLDKWIQRLDLSGFGNVPLSYYGMLQARRFLQSCGCEGYKMREENGCLVICWQDRPLFSISAWRSRK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01437 474 Coils Coil 467 474 - -
Arst5g01437 474 ProSiteProfiles GRAS family profile. 40 471 IPR005202 -
Arst5g01437 474 Pfam GRAS domain family 49 471 IPR005202 -
Arst5g01437 474 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 466 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01437 Arst-Chr5 15910213 15912886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01437 1 474 GRAS Transcription Factor Family AT1G50420 69.008 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst5g01437 GRAS 4.3e-140 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01437 - - cave:132164091 789.26