Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01414 ATGGATAGCACCGCCGAAACAAAATCAAAAAAAATCGACCGCCGCTACGATACTTTGGGAAAGAAGAGAAAGCGATCTAGCAGGTTCGCCTCTACCGAGGTAGCTGTCCTTCCTTCCATGGAAGATTCATCATCCTCATCCTCCTCCACCGCTAACAACGCGCCAAAGCAGAACTGCACCGCCGTCGCATCAGCTTCCTATGGTTTAATATCCGTCATAGGCCGACGGAGAGTCATGGAGGACGCCGTCAGAGTGGTCCCCGGTTTCGTGCCGGTGGAAGACCATTCTGGAGGTTACGATTTCTTTGCGGTTTACGACGGTCACGGTGGAAGTATGGTGGCGAATACTTGCCGCGAGAAGCTGCACATGTTGTTGGCGGAGGAAATGAAGGAGGCGAAAGCAGCAGGGCCTTTGGATTGGCATCAAGTGATATGCTCGTGCTTCATGAAGATGGACCAAGAGATTGGAGGTGGCGAGGGCAATGATGACATGGCGGATGGGAACACCATGGGTTCTACTGCGACGGTGCTTGTTGTTGGAAAGGAGGAGATTGTGGTTGGCAACTGCGGAGACTCTAGGGCGGTGCTGTGTCGCGGCGGCGAAGCCTTGCCGCTTTCACGTGATCATAAGCCTGATCGTGAGGATGAGAAAGAGAGAATAGAAGCAGCAGGTGGAAAAGTGATCGATTGGGATGGGAATCGTGTTTTAGGTGTTCTTGCTACATCAAGATCCATAGGGGACCACTACATGAAGCCATTTGTGATAGCTCAACCGGAGATACAGGTGTCCCCCCGAACAGATTCCGATGAGTTTGTGGTGGTAGCAAGTGATGGACTGTGGGATGTGGTGTCTAACAGTTTTGCGTGCCAACTTGTGAGAAGTTGCCTTAGTGGCAAGACCGGCATGACCACATCCGCGGAGGCAGCCGCCACTCTGCTAGCGGAGCTTGCCATGGCTCGTGGTAGCAAAGACAACATCTCTGTCATTGTGGTCCAGCTCAGTAACGCTGCTTCTCCTTCAACTCCTTCAACTTCAGAATAA 1041 0.5226 MDSTAETKSKKIDRRYDTLGKKRKRSSRFASTEVAVLPSMEDSSSSSSSTANNAPKQNCTAVASASYGLISVIGRRRVMEDAVRVVPGFVPVEDHSGGYDFFAVYDGHGGSMVANTCREKLHMLLAEEMKEAKAAGPLDWHQVICSCFMKMDQEIGGGEGNDDMADGNTMGSTATVLVVGKEEIVVGNCGDSRAVLCRGGEALPLSRDHKPDREDEKERIEAAGGKVIDWDGNRVLGVLATSRSIGDHYMKPFVIAQPEIQVSPRTDSDEFVVVASDGLWDVVSNSFACQLVRSCLSGKTGMTTSAEAAATLLAELAMARGSKDNISVIVVQLSNAASPSTPSTSE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01414 346 ProSiteProfiles PPM-type phosphatase domain profile. 66 333 IPR001932 -
Arst5g01414 346 SMART PP2C_SIG_2 78 333 IPR001932 -
Arst5g01414 346 SMART PP2C_4 56 331 IPR001932 -
Arst5g01414 346 FunFam Protein phosphatase 2C 51 59 340 - -
Arst5g01414 346 PANTHER PROTEIN PHOSPHATASE 43 332 IPR015655 GO:0004722|GO:0006470
Arst5g01414 346 MobiDBLite consensus disorder prediction 1 29 - -
Arst5g01414 346 MobiDBLite consensus disorder prediction 37 55 - -
Arst5g01414 346 SUPERFAMILY PP2C-like 62 335 IPR036457 -
Arst5g01414 346 CDD PP2Cc 66 333 IPR001932 -
Arst5g01414 346 ProSitePatterns PPM-type phosphatase domain signature. 101 109 IPR000222 GO:0043169
Arst5g01414 346 Pfam Protein phosphatase 2C 68 326 IPR001932 -
Arst5g01414 346 Gene3D - 59 338 IPR036457 -
Arst5g01414 346 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01414 Arst-Chr5 15619098 15620695 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01414 67 333 PP2C-type Phosphatase Gene Family AT1G07430 44.304 2.23e-83 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01414 K14497 - gmx:100813248 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01414 5 15619098 15620695 Arst5g01414 5 15619098 15620695 ECH