Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01411 ATGGAGGAGCGCCGTTCCCAGAAGAATAAGGCAAAGCTCTCTACAACTGCAAGTACTAACTCTGAAGAAGTGAGTAGTAATGAGTGGGAATTTATAGAAATGAGCGAGCAAGAGGAGGATCTTATTCGCAGGATGTATGGCCTTGTTGGCGATAGGTGGGATTTGATAGCCGGGCGCATTCCAGGTCGTAAAGCAGAAGAAATTGAGAGATTCTGGATTATGAGACATGGCGATGCTTTTTCTCTTAGAAGAACAAATAATCAACAACAACAACAACTATTTGGTGAAAACTCAGGACGGCTCTCAAGTATCAACTTCACATGA 324 0.429 MEERRSQKNKAKLSTTASTNSEEVSSNEWEFIEMSEQEEDLIRRMYGLVGDRWDLIAGRIPGRKAEEIERFWIMRHGDAFSLRRTNNQQQQQLFGENSGRLSSINFT 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01411 107 Pfam Myb-like DNA-binding domain 34 73 IPR001005 -
Arst5g01411 107 MobiDBLite consensus disorder prediction 11 30 - -
Arst5g01411 107 FunFam MYB-like transcription factor 33 75 - -
Arst5g01411 107 SUPERFAMILY Homeodomain-like 35 78 IPR009057 -
Arst5g01411 107 SMART sant 30 78 IPR001005 -
Arst5g01411 107 CDD SANT 33 72 IPR001005 -
Arst5g01411 107 MobiDBLite consensus disorder prediction 1 30 - -
Arst5g01411 107 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 33 78 - -
Arst5g01411 107 MobiDBLite consensus disorder prediction 88 107 - -
Arst5g01411 107 Gene3D - 34 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01411 Arst-Chr5 15262130 15264438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01411 34 72 MYB Transcription Factor Family AT5G52600 58.974 9.48e-12 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst5g01411 Myb_DNA-binding 1.8e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01411 K09422 - gmx:100814431 127.872