Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01397 ATGCCTGCGCCTCCTCCTAACTACACTCACCACCGCACCAAACTCGTCAGGATAACAGTTACTGACGCTGATGCCACCGACTCCTCCAGCGACGAAGCACAACTCTCATCCTCCACGCGCCACCACCGACACAGAAAGCTCGTCAACGAGATTCTTATCGAGCCCTGTCAAGTGCCTCCCCGGAAGAGACCCAAGAAGTCATCAGCAAGTACCTCCGCCGCCAAGCCCAGAGCTCCGGCCATTCGCCGCCAACTCTCCGGCAGGAAGTTCCGCGGGGTGAGGCAGAGGCCATGGGGGAAATGGGCCGCGGAGATAAGAGACCCTTCACGGCGCGTGAGGTTATGGTTAGGTACCTACGACACCGCGGAGGAAGCTGCCATGGTGTACGACAACGCGGCCATTAAACTGCGTGGACCCGACGCGCTCACCAATTTCATAACGCCGCCACCAACCACAACGCTGGACAGTAATAATAATAATGAAAATAAAACGGCAGCACCAACGGTTTTGGTAAACGGTTACAGTTCCGGTGATGAGGAGTCTCAAAGCACCAACAACAATCATAGTCAGAGTCACAATCTGTTCTCTCCAACTTCGGTGCTTCATCATCATCATCATCATCATCATCATCATCATAATCAGTGTTGTTATTCCTTATCGGAGGAAGGTGAATCCACCGTAACGGGAAAAGAGGATGAATATTCGAGCGTGTCGGAGAATAATAAGGTCAAATCTGAGGAAGACGATTCATCATTCCTTCACATTCCGAGTGATGTGCTCTTTGATTTTCAAGTCTCTTCTTCGCCGTTGGTGGTGCCAGATGTTTTTGAAGAAAGCTTGCTCTTCGCCGATGATTGCGGCGGTTTCCTCACTTCTTGTGAGGACTTTGATTTCAGCTTCAAAAGCTGGCACAGAGAGGATGACTTCTTCCAAGATATAACTGATTTATTCCCTTCAGATCCGCTTCTTGCTCTTTGA 978 0.5041 MPAPPPNYTHHRTKLVRITVTDADATDSSSDEAQLSSSTRHHRHRKLVNEILIEPCQVPPRKRPKKSSASTSAAKPRAPAIRRQLSGRKFRGVRQRPWGKWAAEIRDPSRRVRLWLGTYDTAEEAAMVYDNAAIKLRGPDALTNFITPPPTTTLDSNNNNENKTAAPTVLVNGYSSGDEESQSTNNNHSQSHNLFSPTSVLHHHHHHHHHHHNQCCYSLSEEGESTVTGKEDEYSSVSENNKVKSEEDDSSFLHIPSDVLFDFQVSSSPLVVPDVFEESLLFADDCGGFLTSCEDFDFSFKSWHREDDFFQDITDLFPSDPLLAL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01397 325 CDD AP2 89 145 IPR001471 GO:0003700|GO:0006355
Arst5g01397 325 SMART rav1_2 89 152 IPR001471 GO:0003700|GO:0006355
Arst5g01397 325 FunFam Ethylene-responsive transcription factor 2 88 147 - -
Arst5g01397 325 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Arst5g01397 325 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Arst5g01397 325 MobiDBLite consensus disorder prediction 171 195 - -
Arst5g01397 325 Gene3D AP2/ERF domain 88 147 IPR036955 GO:0003700|GO:0006355
Arst5g01397 325 MobiDBLite consensus disorder prediction 22 85 - -
Arst5g01397 325 SUPERFAMILY DNA-binding domain 89 145 IPR016177 GO:0003677
Arst5g01397 325 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 12 232 - -
Arst5g01397 325 MobiDBLite consensus disorder prediction 227 246 - -
Arst5g01397 325 Pfam AP2 domain 89 138 IPR001471 GO:0003700|GO:0006355
Arst5g01397 325 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01397 Arst-Chr5 15014525 15016330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01397 11 325 AP2-EREBP Transcription Factor Family AT4G23750 42.296 9.78e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst5g01397 AP2 2.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01397 - - ahf:112801434 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01397 5 15014525 15016330 Arst5g01397 5 15014525 15016330 ECH
Arst5g01397 5 15014525 15016330 Arst3g03560 3 95234394 95235986 PCT